RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 TRIM39Q9HCM9 518 aa11.56□□□□□ -0.56
CNOT4-208ENST00000465721 MRPL47Q9HD33 250 aaKnown RBP11.56□□□□□ -0.56
CNOT4-208ENST00000465721 RBM22Q9NW64 420 aaKnown RBP eCLIP11.56□□□□□ -0.56
CNOT4-208ENST00000465721 MYO1AQ9UBC5 1043 aa11.56□□□□□ -0.56
CNOT4-208ENST00000465721 DNAJC16Q9Y2G8 782 aa11.56□□□□□ -0.56
CNOT4-208ENST00000465721 F8P00451 2351 aa11.56□□□□□ -0.56
CNOT4-208ENST00000465721 TCP11X1B4DZS4 312 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 KMOO15229 486 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 SLC25A14O95258 325 aaPredicted RBP11.55□□□□□ -0.56
CNOT4-208ENST00000465721 CLDN1O95832 211 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 DDAH2O95865 285 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 MYBL1P10243 752 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 RPL10P27635 214 aaKnown RBP11.55□□□□□ -0.56
CNOT4-208ENST00000465721 DCTP40126 519 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 PTGIRP43119 386 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 ARSEP51690 589 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 DRG2P55039 364 aaKnown RBP11.55□□□□□ -0.56
CNOT4-208ENST00000465721 INPP5JQ15735 1006 aaPredicted RBP11.55□□□□□ -0.56
CNOT4-208ENST00000465721 ASIC2Q16515 512 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 AGAP9Q5VTM2 703 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 PDPK2PQ6A1A2 396 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 CYB5D1Q6P9G0 228 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 FAM199XQ6PEV8 388 aaPredicted RBP11.55□□□□□ -0.56
CNOT4-208ENST00000465721 WASH2PQ6VEQ5 465 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 MAMDC2Q7Z304 686 aaPredicted RBP11.55□□□□□ -0.56
CNOT4-208ENST00000465721 C11orf96Q7Z7L8 435 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 LRRTM4Q86VH4 590 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 RBM12BQ8IXT5 1001 aaKnown RBP11.55□□□□□ -0.56
CNOT4-208ENST00000465721 TRAM1L1Q8N609 369 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 GPR150Q8NGU9 434 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 CCHCR1Q8TD31 782 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 ADAMTS17Q8TE56 1095 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 LRRN4Q8WUT4 740 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 GLYATL1Q969I3 302 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 FCRL4Q96PJ5 515 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 TRIB3Q96RU7 358 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 ZSCAN5AQ9BUG6 496 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 MLPHQ9BV36 600 aaPredicted RBP11.55□□□□□ -0.56
CNOT4-208ENST00000465721 NUP85Q9BW27 656 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 GPR87Q9BY21 358 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 ISCUQ9H1K1 167 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 PDE7BQ9NP56 450 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 CASS4Q9NQ75 786 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 WASH6PQ9NQA3 447 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 LUZP4Q9P127 313 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 RARRES3Q9UL19 164 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 ADGRG4Q8IZF6 3080 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 CSMD2Q7Z408 3487 aa11.55□□□□□ -0.56
CNOT4-208ENST00000465721 ANKRD66B4E2M5 251 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 MTX2O75431 263 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 EBLN1P0CF75 366 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 CCNCP24863 283 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 COL8A1P27658 744 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 CD86P42081 329 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 CCL11P51671 97 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 DPYSL3Q14195 570 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 GALNT3Q14435 633 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 PIGHQ14442 188 aaPredicted RBP11.54□□□□□ -0.56
CNOT4-208ENST00000465721 KRT81Q14533 505 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 CHRNA6Q15825 494 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 IFI16Q16666 785 aaKnown RBP11.54□□□□□ -0.56
CNOT4-208ENST00000465721 EIF2S3LQ2VIR3 472 aaKnown RBP11.54□□□□□ -0.56
CNOT4-208ENST00000465721 JMJD6Q6NYC1 403 aaPredicted RBP11.54□□□□□ -0.56
CNOT4-208ENST00000465721 CERS6Q6ZMG9 384 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 ZNF517Q6ZMY9 492 aaPredicted RBP11.54□□□□□ -0.56
CNOT4-208ENST00000465721 SIDT2Q8NBJ9 832 aaKnown RBP11.54□□□□□ -0.56
CNOT4-208ENST00000465721 UBXN4Q92575 508 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 TCTN2Q96GX1 697 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 ZNF514Q96K75 400 aaPredicted RBP11.54□□□□□ -0.56
CNOT4-208ENST00000465721 BTBD6Q96KE9 485 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 ING2Q9H160 280 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 ZFYVE1Q9HBF4 777 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 ACSS2Q9NR19 701 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 HAUS2Q9NVX0 235 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 AIPL1Q9NZN9 384 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 TMPRSS11EQ9UL52 423 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 WDR37Q9Y2I8 494 aa11.54□□□□□ -0.56
CNOT4-208ENST00000465721 TACC2O95359 2948 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 WIPF3A6NGB9 483 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 VEGFDO43915 354 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 CPNE3O75131 537 aaKnown RBP11.53□□□□□ -0.56
CNOT4-208ENST00000465721 LDLRP01130 860 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 SLC4A1P02730 911 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 PIRTP0C851 137 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 LPOP22079 712 aaPredicted RBP11.53□□□□□ -0.56
CNOT4-208ENST00000465721 IDSP22304 550 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 FECHP22830 423 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 GBE1Q04446 702 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 ZBTB17Q13105 803 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 GPS2Q13227 327 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 CCDC122Q5T0U0 273 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 CCDC183Q5T5S1 534 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 SLC6A19Q695T7 634 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 TICAM1Q8IUC6 712 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 RBMXL3Q8N7X1 1067 aaKnown RBP11.53□□□□□ -0.56
CNOT4-208ENST00000465721 CNTD1Q8N815 330 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 HDAC11Q96DB2 347 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 CXorf40BQ96DE9 158 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 MAP3K3Q99759 626 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 ZNF670Q9BS34 389 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms