RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PCDHGA3Q9Y5H0 932 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 EFCAB7A8K855 629 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 A8MU76 341 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-206ENST00000464750 GAPDHSO14556 408 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-206ENST00000464750 STX7O15400 261 aaKnown RBP25.45■■□□□ 1.66
U2AF1-206ENST00000464750 PPFIA2O75334 1257 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 C1QL1O75973 258 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 VIPP01282 170 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 VCLP18206 1134 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 XRCC1P18887 633 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-206ENST00000464750 OLIG2Q13516 323 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 ITGA9Q13797 1035 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 PRPSAP1Q14558 356 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 MANEAQ5SRI9 462 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 LDLRAP1Q5SW96 308 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 PEX26Q7Z412 305 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 DDHD1Q8NEL9 900 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 CCDC110Q8TBZ0 833 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 SPATA13Q96N96 652 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 APOL2Q9BQE5 337 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 SLC39A1Q9NY26 324 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 ZNF624Q9P2J8 865 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-206ENST00000464750 AAR2Q9Y312 384 aaKnown RBP25.45■■□□□ 1.66
U2AF1-206ENST00000464750 ARL5AQ9Y689 179 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 KALRNO60229 2985 aa25.45■■□□□ 1.66
U2AF1-206ENST00000464750 STMND1H3BQB6 276 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 RPL10P27635 214 aaKnown RBP25.44■■□□□ 1.66
U2AF1-206ENST00000464750 CA5AP35218 305 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 ADRA1AP35348 466 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 SLC19A1P41440 591 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 ARSDP51689 593 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 KIF5AQ12840 1032 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 PTPRCAPQ14761 206 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 ABRAXAS1Q6UWZ7 409 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 TMEM26Q6ZUK4 368 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 ARHGAP22Q7Z5H3 698 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 SPC24Q8NBT2 197 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 WBP1Q96G27 269 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 DDA1Q9BW61 102 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 UCK1Q9HA47 277 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 POT1Q9NUX5 634 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 SMOXQ9NWM0 555 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 KLHL3Q9UH77 587 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 PACSIN2Q9UNF0 486 aaPredicted RBP25.44■■□□□ 1.66
U2AF1-206ENST00000464750 B3GALT1Q9Y5Z6 326 aa25.44■■□□□ 1.66
U2AF1-206ENST00000464750 A0A0U1RQJ8 604 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 B4E171 279 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 PTMAP06454 111 aaKnown RBP25.43■■□□□ 1.66
U2AF1-206ENST00000464750 BRAFP15056 766 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 IDSP22304 550 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 CDC25BP30305 580 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 TSPAN7P41732 249 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 DRG2P55039 364 aaKnown RBP25.43■■□□□ 1.66
U2AF1-206ENST00000464750 C19orf57Q0VDD7 668 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 GPRC6AQ5T6X5 926 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 RANBP10Q6VN20 620 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 SYCE1Q8N0S2 351 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 TXLNBQ8N3L3 684 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 UBL4BQ8N7F7 174 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 BMPERQ8N8U9 685 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 RASGEF1AQ8N9B8 481 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 IMPACTQ9P2X3 320 aa25.43■■□□□ 1.66
U2AF1-206ENST00000464750 MN1Q10571 1320 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-206ENST00000464750 OR52A4PA6NMU1 304 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 C2orf81A6NN90 581 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 PRAMEF1O95521 474 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 FTCDO95954 541 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 LPOP22079 712 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-206ENST00000464750 CTSCP53634 463 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 RAB15P59190 212 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 TAF1AQ15573 450 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-206ENST00000464750 AGAP9Q5VTM2 703 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 WASH2PQ6VEQ5 465 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 JPH3Q8WXH2 748 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-206ENST00000464750 WASH6PQ9NQA3 447 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 OGFRQ9NZT2 677 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 FKBPLQ9UIM3 349 aa25.42■■□□□ 1.66
U2AF1-206ENST00000464750 GOLGA6L9A6NEM1 432 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 MIF4GDA9UHW6 222 aaKnown RBP25.41■■□□□ 1.66
U2AF1-206ENST00000464750 ZNF189O75820 626 aaPredicted RBP25.41■■□□□ 1.66
U2AF1-206ENST00000464750 GFERP55789 205 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 DCAF12Q5T6F0 453 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 ANKS6Q68DC2 871 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 PLXDC1Q8IUK5 500 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 OR4K2Q8NGD2 314 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 CXorf40BQ96DE9 158 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 SGF29Q96ES7 293 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 PPP1R2P1Q96PQ5 205 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 ASPSCR1Q9BZE9 553 aa25.41■■□□□ 1.66
U2AF1-206ENST00000464750 OR2AG2A6NM03 316 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 DDX3YO15523 660 aaKnown RBP25.4■■□□□ 1.66
U2AF1-206ENST00000464750 KCNJ13O60928 360 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 UBXN7O94888 489 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 TYRP1P17643 537 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 AKT1P31749 480 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 ATP1A2P50993 1020 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 DMPKQ09013 629 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 TMEM220Q6QAJ8 160 aa25.4■■□□□ 1.66
U2AF1-206ENST00000464750 AMZ2Q86W34 360 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms