RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 RAD1O60671 282 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 UBXN7O94888 489 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 NDUFA10O95299 355 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 AMD1P17707 334 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 CA5AP35218 305 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 ZNF75DP51815 510 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 DRG2P55039 364 aaKnown RBP18.54■□□□□ 0.56
SF3A1-205ENST00000463818 COPS2P61201 443 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 TBR1Q16650 682 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 AGAP9Q5VTM2 703 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 FAM151BQ6UXP7 276 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 CEACAM20Q6UY09 585 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 GLT6D1Q7Z4J2 308 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 PANX2Q96RD6 677 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 SLC12A9Q9BXP2 914 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 APMAPQ9HDC9 416 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 PILRAQ9UKJ1 303 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 PKP3Q9Y446 797 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 DUSP10Q9Y6W6 482 aa18.54■□□□□ 0.56
SF3A1-205ENST00000463818 HELZ2Q9BYK8 2649 aaKnown RBP18.54■□□□□ 0.56
SF3A1-205ENST00000463818 GLYATL1P3A0A0U1RQE8 302 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 OR52A4PA6NMU1 304 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 KCNJ13O60928 360 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 POP7O75817 140 aaKnown RBP18.53■□□□□ 0.56
SF3A1-205ENST00000463818 ZIC2O95409 532 aaPredicted RBP18.53■□□□□ 0.56
SF3A1-205ENST00000463818 VCLP18206 1134 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 CTNNA1P35221 906 aaKnown RBP18.53■□□□□ 0.56
SF3A1-205ENST00000463818 GEMP55040 296 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 NAP1L1P55209 391 aaKnown RBP18.53■□□□□ 0.56
SF3A1-205ENST00000463818 GFERP55789 205 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 PTPRCAPQ14761 206 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 CLCA4Q14CN2 919 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 TMEM220Q6QAJ8 160 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 TMTC1Q8IUR5 882 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 RASGEF1AQ8N9B8 481 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 ACTL9Q8TC94 416 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 C9orf72Q96LT7 481 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 ZPBPQ9BS86 351 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 FICDQ9BVA6 458 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 FSD1LQ9BXM9 530 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 PIEZO2Q9H5I5 2752 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 SLC40A1Q9NP59 571 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 POT1Q9NUX5 634 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 WDR37Q9Y2I8 494 aa18.53■□□□□ 0.56
SF3A1-205ENST00000463818 COL6A6A6NMZ7 2263 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 POLR1CO15160 346 aaPredicted RBP18.52■□□□□ 0.56
SF3A1-205ENST00000463818 STX7O15400 261 aaKnown RBP18.52■□□□□ 0.56
SF3A1-205ENST00000463818 GPR39O43194 453 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 PPFIA2O75334 1257 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 ANXA9O76027 345 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 C9P02748 559 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 LIFP15018 202 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 CTSCP53634 463 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 OTUD4Q01804 1114 aaKnown RBP18.52■□□□□ 0.56
SF3A1-205ENST00000463818 LDLRAP1Q5SW96 308 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 AMZ2Q86W34 360 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 ZNF398Q8TD17 642 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 CXorf40BQ96DE9 158 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 MRFAP1L1Q96HT8 127 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 CALR3Q96L12 384 aaKnown RBP18.52■□□□□ 0.56
SF3A1-205ENST00000463818 TGM7Q96PF1 710 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 GORASP1Q9BQQ3 440 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 OSBPL8Q9BZF1 889 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 GBA3Q9H227 469 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 EFR3BQ9Y2G0 817 aa18.52■□□□□ 0.56
SF3A1-205ENST00000463818 MN1Q10571 1320 aaPredicted RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 J3QKU1 62 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 GAPDHSO14556 408 aaPredicted RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 CAPN5O15484 640 aaPredicted RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 ANKRD34CP0C6C1 535 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 FAM87AP0C7U9 286 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 MAP4P27816 1152 aaKnown RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 LEPRP48357 1165 aaKnown RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 ITGA9Q13797 1035 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 ANKRD20A2Q5SQ80 823 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 GPRC6AQ5T6X5 926 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 ANKRD20A1Q5TYW2 823 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 ANKRD20A3Q5VUR7 823 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 ITPRIPL1Q6GPH6 555 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 DARS2Q6PI48 645 aaKnown RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 RANBP10Q6VN20 620 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 TIPARPQ7Z3E1 657 aaKnown RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 RBM12BQ8IXT5 1001 aaKnown RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 NLGN4XQ8N0W4 816 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 DDHD1Q8NEL9 900 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 NLGN4YQ8NFZ3 816 aaPredicted RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 FERMT1Q9BQL6 677 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 ZCCHC2Q9C0B9 1178 aaKnown RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 LACRTQ9GZZ8 138 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 RBSNQ9H1K0 784 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 REXO2Q9Y3B8 237 aaKnown RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 ARL5AQ9Y689 179 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 DNMT3AQ9Y6K1 912 aaPredicted RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 ZFC3H1O60293 1989 aaKnown RBP18.51■□□□□ 0.55
SF3A1-205ENST00000463818 SDK2Q58EX2 2172 aa18.51■□□□□ 0.55
SF3A1-205ENST00000463818 MACROD2A1Z1Q3 448 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 CCDC66A2RUB6 948 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 BTNL10A8MVZ5 291 aa18.5■□□□□ 0.55
SF3A1-205ENST00000463818 IPO7O95373 1038 aaKnown RBP18.5■□□□□ 0.55
SF3A1-205ENST00000463818 RBP3P10745 1247 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms