RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CNGA2Q16280 664 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 SLC18A3Q16572 532 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 KCTD19Q17RG1 926 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 EMC10Q5UCC4 262 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 SLC36A4Q6YBV0 504 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 FAM183BPQ6ZVS7 135 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 NAXDQ8IW45 347 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 TMEM86AQ8N2M4 240 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 KIAA1524Q8TCG1 905 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 C2orf15Q8WU43 125 aaKnown RBP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 SLC35F5Q8WV83 523 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 DNASE2BQ8WZ79 361 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 ATP2A3Q93084 1043 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 WBP1Q96G27 269 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 HNRNPABQ99729 332 aaKnown RBP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 ACBD6Q9BR61 282 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 MAGEB5Q9BZ81 275 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 FAM124BQ9H5Z6 455 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-204ENST00000463622 CPNE5Q9HCH3 593 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 OSER1Q9NX31 292 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 CDH9Q9ULB4 789 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 HYOU1Q9Y4L1 999 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 PAXBP1Q9Y5B6 917 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 PCDHGB2Q9Y5G2 931 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 MRFAP1Q9Y605 127 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 PTPRDP23468 1912 aa3.71□□□□□ -1.82
SCFD1-204ENST00000463622 VWC2LB2RUY7 222 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 EIF3CLB5ME19 914 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 I6L893 689 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 F2RL2O00254 374 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MDM4O15151 490 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SGTAO43765 313 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 GRAP2O75791 330 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 FTLP02792 175 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 FYNP06241 537 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ATXN1LP0C7T5 689 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 P4HA1P13674 534 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MALP21145 153 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 TNFAIP3P21580 790 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 EIF2S3P41091 472 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 EIF2DP41214 584 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ABCG1P45844 678 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 LHX1P48742 406 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 RPL34P49207 117 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 RPL7AP62424 266 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ZXDBP98169 803 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CFHR1Q03591 330 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ADIGQ0VDE8 80 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 RAB39AQ14964 217 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 VEPH1Q14D04 833 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 EOGTQ5NDL2 527 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CCDC122Q5T0U0 273 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 RNF187Q5TA31 235 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 TXNRD3NBQ6F5E7 133 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ACAD10Q6JQN1 1059 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ALKBH5Q6P6C2 394 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SCD5Q86SK9 330 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MARCH9Q86YJ5 346 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 TMTC1Q8IUR5 882 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SFTPA1Q8IWL2 248 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SCN4BQ8IWT1 228 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MCOLN2Q8IZK6 566 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 GALNT15Q8N3T1 639 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ALLCQ8N6M5 410 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ARFGAP1Q8N6T3 406 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 EMC1Q8N766 993 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ANKRD52Q8NB46 1076 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MRPS31Q92665 395 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 WBP2Q969T9 261 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 PPP1R13BQ96KQ4 1090 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 GCNAQ96QF7 691 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SLC22A12Q96S37 553 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CYP2S1Q96SQ9 504 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 EIF3CQ99613 913 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SEPT5Q99719 369 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 HEPHQ9BQS7 1158 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MED10Q9BTT4 135 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ULBP1Q9BZM6 244 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MIS12Q9H081 205 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ISCUQ9H1K1 167 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CLMPQ9H6B4 373 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 NMUR1Q9HB89 426 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CSNK1G1Q9HCP0 422 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ANLNQ9NQW6 1124 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 PPP2R2CQ9Y2T4 447 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 WNT6Q9Y6F9 365 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MGAQ8IWI9 3026 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 TICRRQ7Z2Z1 1910 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 IGHV1OR15-9A0A0B4J2B8 117 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 A0A1W2PQF6 199 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 YJEFN3A6XGL0 299 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 E7ENQ6 273 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 GOLGA8SH3BPF8 625 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CAPN9O14815 690 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 XPO1O14980 1071 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 BUB1O43683 1085 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 VPS4BO75351 444 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF217O75362 1048 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms