RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 LLGL1Q15334 1064 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 ATP13A5Q4VNC0 1218 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 RAD9BQ6WBX8 426 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 B4GALNT4Q76KP1 1039 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 ARHGAP22Q7Z5H3 698 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 PLXDC1Q8IUK5 500 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 KLHDC8BQ8IXV7 354 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 UBL4BQ8N7F7 174 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 BLOC1S5Q8TDH9 187 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 KCTD12Q96CX2 325 aaKnown RBP11.72□□□□□ -0.53
RTCB-202ENST00000463455 TTC25Q96NG3 672 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
RTCB-202ENST00000463455 ZPBPQ9BS86 351 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 HEMGNQ9BXL5 484 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 LACRTQ9GZZ8 138 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 ZMYND15Q9H091 742 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 OSGEPL1Q9H4B0 414 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 TFR2Q9UP52 801 aa11.72□□□□□ -0.53
RTCB-202ENST00000463455 REXO2Q9Y3B8 237 aaKnown RBP11.72□□□□□ -0.53
RTCB-202ENST00000463455 GLYATL1P3A0A0U1RQE8 302 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 GRID2IPA4D2P6 1211 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 GOLGA6L9A6NEM1 432 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 C2orf81A6NN90 581 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 SNX2O60749 519 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ITGB2P05107 769 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 PYGMP11217 842 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 FGF3P11487 239 aaPredicted RBP11.71□□□□□ -0.53
RTCB-202ENST00000463455 CCL4P13236 92 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 LPOP22079 712 aaPredicted RBP11.71□□□□□ -0.53
RTCB-202ENST00000463455 IDSP22304 550 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ADRA1AP35348 466 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ATP1A2P50993 1020 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 EIF3EP60228 445 aaKnown RBP11.71□□□□□ -0.53
RTCB-202ENST00000463455 KIF5AQ12840 1032 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 TAF1AQ15573 450 aaPredicted RBP11.71□□□□□ -0.53
RTCB-202ENST00000463455 TAF1BQ53T94 588 aaPredicted RBP11.71□□□□□ -0.53
RTCB-202ENST00000463455 ANKRD20A2Q5SQ80 823 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ANKRD20A1Q5TYW2 823 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ANKRD20A3Q5VUR7 823 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 NKAIN2Q5VXU1 208 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 CRTC3Q6UUV7 619 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 RANBP10Q6VN20 620 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 TMEM26Q6ZUK4 368 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 PEX26Q7Z412 305 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 C11orf96Q7Z7L8 435 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 KIAA1328Q86T90 577 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ZNF547Q8IVP9 402 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 SLC25A41Q8N5S1 370 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ZSCAN1Q8NBB4 408 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 RCBTB1Q8NDN9 531 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 TTC9Q92623 222 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ALG3Q92685 438 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 SPATA13Q96N96 652 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ARNT2Q9HBZ2 717 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 PRDM8Q9NQV8 689 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 FOXJ2Q9P0K8 574 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 TSR3Q9UJK0 312 aaKnown RBP11.71□□□□□ -0.53
RTCB-202ENST00000463455 AMFRQ9UKV5 643 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 TMPRSS11EQ9UL52 423 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 DUSP10Q9Y6W6 482 aa11.71□□□□□ -0.53
RTCB-202ENST00000463455 ZNF106Q9H2Y7 1883 aaKnown RBP11.7□□□□□ -0.54
RTCB-202ENST00000463455 MACROD2A1Z1Q3 448 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 GOLGA6L6A8MZA4 724 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 STX7O15400 261 aaKnown RBP11.7□□□□□ -0.54
RTCB-202ENST00000463455 KCNN4O15554 427 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 KALRNO60229 2985 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 VIPP01282 170 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 C9P02748 559 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 HALP42357 657 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 CHRNA4P43681 627 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 MC2RQ01718 297 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 NFATC2Q13469 925 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 KHDC1Q4VXA5 237 aaKnown RBP11.7□□□□□ -0.54
RTCB-202ENST00000463455 MANEAQ5SRI9 462 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 DCAF12Q5T6F0 453 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 DARS2Q6PI48 645 aaKnown RBP11.7□□□□□ -0.54
RTCB-202ENST00000463455 PCSK4Q6UW60 755 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 TRAPPC5Q8IUR0 188 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 TMEM139Q8IV31 216 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 TRIM48Q8IWZ4 208 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 BMPERQ8N8U9 685 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 ACRBPQ8NEB7 543 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 GDAP1Q8TB36 358 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 HEXDCQ8WVB3 486 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 NCSTNQ92542 709 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 ART4Q93070 314 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 SGF29Q96ES7 293 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 GORASP1Q9BQQ3 440 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 RAB33BQ9H082 229 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 BPIFA1Q9NP55 256 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 FBXO8Q9NRD0 319 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 SLC39A1Q9NY26 324 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 SLC23A2Q9UGH3 650 aa11.7□□□□□ -0.54
RTCB-202ENST00000463455 SDK2Q58EX2 2172 aa11.69□□□□□ -0.54
RTCB-202ENST00000463455 TRBV23OR9-2A0A075B6M9 112 aa11.69□□□□□ -0.54
RTCB-202ENST00000463455 EFCAB7A8K855 629 aa11.69□□□□□ -0.54
RTCB-202ENST00000463455 AGAP14A8MT82 685 aa11.69□□□□□ -0.54
RTCB-202ENST00000463455 PDZK1P1A8MUH7 402 aa11.69□□□□□ -0.54
RTCB-202ENST00000463455 GAPDHSO14556 408 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms