RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 EIF3EP60228 445 aaKnown RBP18.64■□□□□ 0.57
VARS-220ENST00000461874 GTF2H3Q13889 308 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 SEPT7Q16181 437 aaKnown RBP18.64■□□□□ 0.57
VARS-220ENST00000461874 AGAP9Q5VTM2 703 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 RANBP10Q6VN20 620 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 TMEM26Q6ZUK4 368 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 GAS2L3Q86XJ1 694 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 TRAPPC5Q8IUR0 188 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 TTC25Q96NG3 672 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 FICDQ9BVA6 458 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 UGT1A7Q9HAW7 530 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 UGT1A10Q9HAW8 530 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 UGT1A8Q9HAW9 530 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 ZNF462Q96JM2 2506 aa18.64■□□□□ 0.57
VARS-220ENST00000461874 COL6A6A6NMZ7 2263 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 MACROD2A1Z1Q3 448 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 GPR39O43194 453 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 KCNJ13O60928 360 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 TJP3O95049 919 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 RBP3P10745 1247 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 PYGMP11217 842 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 VCLP18206 1134 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 IDSP22304 550 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 RPL10P27635 214 aaKnown RBP18.63■□□□□ 0.57
VARS-220ENST00000461874 CA5AP35218 305 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 ADRA1AP35348 466 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 CETN2P41208 172 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 MC2RQ01718 297 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 ITGA9Q13797 1035 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 LY6DQ14210 128 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 ANKRD20A2Q5SQ80 823 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 LDLRAP1Q5SW96 308 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 DCAF12Q5T6F0 453 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 ANKRD20A1Q5TYW2 823 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 ANKRD20A3Q5VUR7 823 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 AADACL2Q6P093 401 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 DARS2Q6PI48 645 aaKnown RBP18.63■□□□□ 0.57
VARS-220ENST00000461874 PLXDC1Q8IUK5 500 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 TRIM48Q8IWZ4 208 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 RASGEF1AQ8N9B8 481 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 DDHD1Q8NEL9 900 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 JPH3Q8WXH2 748 aaPredicted RBP18.63■□□□□ 0.57
VARS-220ENST00000461874 NKD1Q969G9 470 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 BAG1Q99933 345 aaPredicted RBP18.63■□□□□ 0.57
VARS-220ENST00000461874 FAM118BQ9BPY3 351 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 ZCCHC2Q9C0B9 1178 aaKnown RBP18.63■□□□□ 0.57
VARS-220ENST00000461874 SEMA4CQ9C0C4 833 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 OGFRQ9NZT2 677 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 AAR2Q9Y312 384 aaKnown RBP18.63■□□□□ 0.57
VARS-220ENST00000461874 PCDHGA4Q9Y5G9 962 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 SLC30A1Q9Y6M5 507 aa18.63■□□□□ 0.57
VARS-220ENST00000461874 STX7O15400 261 aaKnown RBP18.62■□□□□ 0.57
VARS-220ENST00000461874 KCNN4O15554 427 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 STK10O94804 968 aaKnown RBP18.62■□□□□ 0.57
VARS-220ENST00000461874 WT1P19544 449 aaPredicted RBP18.62■□□□□ 0.57
VARS-220ENST00000461874 PSMB4P28070 264 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 ATP1A2P50993 1020 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 DRG2P55039 364 aaKnown RBP18.62■□□□□ 0.57
VARS-220ENST00000461874 PTPRCAPQ14761 206 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 GPRC6AQ5T6X5 926 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 ANKS6Q68DC2 871 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 KIAA1328Q86T90 577 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 TMEM139Q8IV31 216 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 SLC40A1Q9NP59 571 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 POT1Q9NUX5 634 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 SMOXQ9NWM0 555 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 KLHL3Q9UH77 587 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 ARL5AQ9Y689 179 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 MN1Q10571 1320 aaPredicted RBP18.62■□□□□ 0.57
VARS-220ENST00000461874 SDK2Q58EX2 2172 aa18.62■□□□□ 0.57
VARS-220ENST00000461874 GCN1Q92616 2671 aaKnown RBP18.62■□□□□ 0.57
VARS-220ENST00000461874 OR52A4PA6NMU1 304 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 C2orf81A6NN90 581 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 POP7O75817 140 aaKnown RBP18.61■□□□□ 0.57
VARS-220ENST00000461874 UBXN7O94888 489 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 C9P02748 559 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 ANKRD34CP0C6C1 535 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 LPOP22079 712 aaPredicted RBP18.61■□□□□ 0.57
VARS-220ENST00000461874 CTSCP53634 463 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 DMPKQ09013 629 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 OLIG2Q13516 323 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 PRPSAP1Q14558 356 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 CLCA4Q14CN2 919 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 TAF1AQ15573 450 aaPredicted RBP18.61■□□□□ 0.57
VARS-220ENST00000461874 AMZ2Q86W34 360 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 RBM12BQ8IXT5 1001 aaKnown RBP18.61■□□□□ 0.57
VARS-220ENST00000461874 ZSCAN1Q8NBB4 408 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 CCDC110Q8TBZ0 833 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 ZNF398Q8TD17 642 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 RTP4Q96DX8 246 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 SPATA13Q96N96 652 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 TEFMQ96QE5 360 aaKnown RBP18.61■□□□□ 0.57
VARS-220ENST00000461874 APOL2Q9BQE5 337 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 FBXO8Q9NRD0 319 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 TRIM10Q9UDY6 481 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 AMFRQ9UKV5 643 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 WDR37Q9Y2I8 494 aa18.61■□□□□ 0.57
VARS-220ENST00000461874 DNMT3AQ9Y6K1 912 aaPredicted RBP18.61■□□□□ 0.57
VARS-220ENST00000461874 C5orf60A6NFR6 353 aa18.6■□□□□ 0.57
VARS-220ENST00000461874 PRAMEF1O95521 474 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms