RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 IPPKQ9H8X2 491 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.93□□□□□ -0.5
SEC16A-207ENST00000453963 SMIM28A0A1B0GU29 152 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 TLR5O60602 858 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 IGFBP4P22692 258 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 PTX3P26022 381 aaPredicted RBP11.93□□□□□ -0.5
SEC16A-207ENST00000453963 GPX6P59796 221 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 GMFBP60983 142 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 CCNIQ14094 377 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 DENND1CQ8IV53 801 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 TTC29Q8NA56 475 aaPredicted RBP11.93□□□□□ -0.5
SEC16A-207ENST00000453963 OR5K1Q8NHB7 308 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 CITED4Q96RK1 184 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 WDR37Q9Y2I8 494 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 H3BSA7 217 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 ITM2AO43736 263 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 NCK1P16333 377 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 RAET1GQ6H3X3 334 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 SERPINA13PQ6UXR4 307 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 UBE2R2Q712K3 238 aaPredicted RBP11.93□□□□□ -0.5
SEC16A-207ENST00000453963 FAM220AQ7Z4H9 259 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 TMEM126BQ8IUX1 230 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 SCAIQ8N9R8 606 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 DNAJB8Q8NHS0 232 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 SPPL2BQ8TCT7 592 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 AZIN2Q96A70 460 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 BTN2A3PQ96KV6 586 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 KCTD5Q9NXV2 234 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 URADA6NGE7 173 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 FADS2P1A8MWK0 482 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 DUSP11O75319 330 aaKnown RBP11.93□□□□□ -0.5
SEC16A-207ENST00000453963 ECDO95905 644 aaPredicted RBP11.93□□□□□ -0.5
SEC16A-207ENST00000453963 ASLP04424 464 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 PRPS2P11908 318 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 OR1D2P34982 312 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 PTPN5P54829 565 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 TCEAL1Q15170 157 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 CARTPTQ16568 116 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 GPAT3Q53EU6 434 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 DET1Q7L5Y6 550 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 RASAL3Q86YV0 1011 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 IPCEF1Q8WWN9 437 aaPredicted RBP11.93□□□□□ -0.5
SEC16A-207ENST00000453963 LRRC3Q9BY71 257 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 HIPK3Q9H422 1215 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 BRD9Q9H8M2 597 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 TMEM9Q9P0T7 183 aa11.93□□□□□ -0.5
SEC16A-207ENST00000453963 MAFBQ9Y5Q3 323 aaPredicted RBP11.93□□□□□ -0.5
SEC16A-207ENST00000453963 ARHGEF33A8MVX0 844 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 C9JVG2 144 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 CXCR6O00574 342 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 CHST10O43529 356 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 TBL1XO60907 577 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 RPLP0P05388 317 aaKnown RBP11.92□□□□□ -0.5
SEC16A-207ENST00000453963 AMD1P17707 334 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 UGT1A6P19224 532 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 UGT1A1P22309 533 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 UGT1A4P22310 534 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 UGT1A3P35503 534 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 UGT1A5P35504 534 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 C11orf65Q8NCR3 313 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 SEC14L1Q92503 715 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 CXorf40BQ96DE9 158 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 FEM1AQ9BSK4 669 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 DNAJC11Q9NVH1 559 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 CHURC1-FNTBB4DL54 471 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 NT5C1B-RDH14C9J2C7 533 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 FANCGO15287 622 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 CLDN9O95484 217 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 C8BP07358 591 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 PITRM1Q5JRX3 1037 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 LCN1P1Q5VSP4 162 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 SDHAF4Q5VUM1 108 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 OGFOD2Q6N063 350 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 FAM151BQ6UXP7 276 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 FRMD7Q6ZUT3 714 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 OR10A6Q8NH74 314 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 SPATA22Q8NHS9 363 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 CANT1Q8WVQ1 401 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 ABCG8Q9H221 673 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 PREBQ9HCU5 417 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 FZD10Q9ULW2 581 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 IRAK3Q9Y616 596 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 C3P01024 1663 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 MED1Q15648 1581 aaPredicted RBP11.92□□□□□ -0.5
SEC16A-207ENST00000453963 MYO5BQ9ULV0 1848 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 TCRBV7S3A2A0A539 114 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 FAM234BA2RU67 622 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 FPGTO14772 594 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 SLC30A4O14863 429 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 UGT2B17O75795 530 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 CCNYL3P0C7X3 344 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 CXCR3P49682 368 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 KCNJ11Q14654 390 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 TAF13Q15543 124 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 AGMOQ6ZNB7 445 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 DAW1Q8N136 415 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 PYROXD2Q8N2H3 581 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms