RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 TMPRSS3P57727 454 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 UBE2IP63279 158 aaKnown RBP17.65■□□□□ 0.42
CTNS-204ENST00000452111 TMPRSS15P98073 1019 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 CLN3Q13286 438 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 MSLNQ13421 630 aaPredicted RBP17.65■□□□□ 0.42
CTNS-204ENST00000452111 SQSTM1Q13501 440 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 TRA2AQ13595 282 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTNS-204ENST00000452111 SNAP47Q5SQN1 464 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 TMEM71Q6P5X7 295 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 DET1Q7L5Y6 550 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 AVL9Q8NBF6 648 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 NCSTNQ92542 709 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 USP7Q93009 1102 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 DPYSL5Q9BPU6 564 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.65■□□□□ 0.42
CTNS-204ENST00000452111 ASB8Q9H765 288 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 CPNE5Q9HCH3 593 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 SMOXQ9NWM0 555 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 FOXJ2Q9P0K8 574 aa17.65■□□□□ 0.42
CTNS-204ENST00000452111 SMG1Q96Q15 3661 aaKnown RBP17.64■□□□□ 0.41
CTNS-204ENST00000452111 PRR19A6NJB7 356 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 NVLO15381 856 aaKnown RBP17.64■□□□□ 0.41
CTNS-204ENST00000452111 POP7O75817 140 aaKnown RBP17.64■□□□□ 0.41
CTNS-204ENST00000452111 SRP72O76094 671 aaKnown RBP17.64■□□□□ 0.41
CTNS-204ENST00000452111 VIPP01282 170 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 CCDC175P0C221 793 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 BRAFP15056 766 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 MSH3P20585 1137 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 IDSP22304 550 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 PBLDP30039 288 aaPredicted RBP17.64■□□□□ 0.41
CTNS-204ENST00000452111 SLC19A1P41440 591 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 ZNF140P52738 457 aaPredicted RBP17.64■□□□□ 0.41
CTNS-204ENST00000452111 P3H1Q32P28 736 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 KCTD11Q693B1 232 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 TMEM220Q6QAJ8 160 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 AMZ2Q86W34 360 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 LRRC8AQ8IWT6 810 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 KLHDC8BQ8IXV7 354 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 NAT14Q8WUY8 206 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 LRRC40Q9H9A6 602 aa17.64■□□□□ 0.41
CTNS-204ENST00000452111 PIH1D1Q9NWS0 290 aaKnown RBP17.64■□□□□ 0.41
CTNS-204ENST00000452111 ZNF624Q9P2J8 865 aaPredicted RBP17.64■□□□□ 0.41
CTNS-204ENST00000452111 FEZ2Q9UHY8 353 aaPredicted RBP17.64■□□□□ 0.41
CTNS-204ENST00000452111 LILRA5A6NI73 299 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 OR52A4PA6NMU1 304 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 A8MU76 341 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 C9orf172C9J069 976 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 CCL22O00626 93 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 LIASO43766 372 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 TPH1P17752 444 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 XRCC1P18887 633 aaPredicted RBP17.63■□□□□ 0.41
CTNS-204ENST00000452111 CSTF2P33240 577 aaKnown RBP eCLIP17.63■□□□□ 0.41
CTNS-204ENST00000452111 EPHA4P54764 986 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 UCNP55089 124 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 XIAPP98170 497 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 PDE1BQ01064 536 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 RPS6KA1Q15418 735 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 LONRF2Q1L5Z9 754 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 FNBP1LQ5T0N5 605 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 ARHGAP40Q5TG30 622 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 MEI1Q5TIA1 1274 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 GPR155Q7Z3F1 870 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 SLC13A5Q86YT5 568 aaPredicted RBP17.63■□□□□ 0.41
CTNS-204ENST00000452111 BEND7Q8N7W2 519 aaPredicted RBP17.63■□□□□ 0.41
CTNS-204ENST00000452111 AGBL5Q8NDL9 886 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 C1orf54Q8WWF1 131 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 ALS2CR12Q96Q35 445 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 ARNT2Q9HBZ2 717 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 KLHL3Q9UH77 587 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 CRLS1Q9UJA2 301 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 WDR37Q9Y2I8 494 aa17.63■□□□□ 0.41
CTNS-204ENST00000452111 LDB2O43679 373 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 AP2A1O95782 977 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 IFNB1P01574 187 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 FGF3P11487 239 aaPredicted RBP17.62■□□□□ 0.41
CTNS-204ENST00000452111 SEPT6Q14141 434 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 CLCA4Q14CN2 919 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 TGIF1Q15583 401 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 TMEM164Q5U3C3 297 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 AGAP9Q5VTM2 703 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 WDR74Q6RFH5 385 aaPredicted RBP17.62■□□□□ 0.41
CTNS-204ENST00000452111 ABRAXAS1Q6UWZ7 409 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 WASH2PQ6VEQ5 465 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 TMEM26Q6ZUK4 368 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 MICALCLQ6ZW33 695 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 FAM129CQ86XR2 697 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 PMEPA1Q969W9 287 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 CXorf40BQ96DE9 158 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 SGF29Q96ES7 293 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 DNAJC1Q96KC8 554 aaKnown RBP17.62■□□□□ 0.41
CTNS-204ENST00000452111 BBC3Q96PG8 261 aaPredicted RBP17.62■□□□□ 0.41
CTNS-204ENST00000452111 FAM96AQ9H5X1 160 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 WASH6PQ9NQA3 447 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 POT1Q9NUX5 634 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 ACSL6Q9UKU0 697 aa17.62■□□□□ 0.41
CTNS-204ENST00000452111 ZFC3H1O60293 1989 aaKnown RBP17.62■□□□□ 0.41
CTNS-204ENST00000452111 EFCAB7A8K855 629 aa17.61■□□□□ 0.41
CTNS-204ENST00000452111 TYRP1P17643 537 aa17.61■□□□□ 0.41
CTNS-204ENST00000452111 ITGALP20701 1170 aa17.61■□□□□ 0.41
CTNS-204ENST00000452111 HADHAP40939 763 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms