RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TRIM68Q6AZZ1 485 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 ERAP2Q6P179 960 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 YAF2Q8IY57 180 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 MYO1HQ8N1T3 1032 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 KIF2BQ8N4N8 673 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 GPR26Q8NDV2 337 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 CEP70Q8NHQ1 597 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 EEF1AKMT1Q8WVE0 214 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 EXT2Q93063 718 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 FUBP1Q96AE4 644 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 MCUR1Q96AQ8 359 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 FAM136AQ96C01 138 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 TIFAQ96CG3 184 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 RSPRY1Q96DX4 576 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 FAM83CQ9BQN1 747 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 TBC1D10AQ9BXI6 508 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 C1QTNF3Q9BXJ4 246 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 EBF3Q9H4W6 596 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 IGFLR1Q9H665 355 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 SARS2Q9NP81 518 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 PFDN4Q9NQP4 134 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 LATS2Q9NRM7 1088 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 SPATS2LQ9NUQ6 558 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 NUDT4Q9NZJ9 180 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 STK38LQ9Y2H1 464 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 MYO7AQ13402 2215 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 EDDM13A0A1B0GTR0 161 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 A8MX80 341 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 B2RBV5 119 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 PSMD11O00231 422 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 QSOX1O00391 747 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 GIPC1O14908 333 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TRIM24O15164 1050 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 ECI2O75521 394 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 MLYCDO95822 493 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TSPAN12O95859 305 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 FGF4P08620 206 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 C1SP09871 688 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 OR56A5P0C7T3 313 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CBSLP0DN79 551 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 MTHFD2P13995 350 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 HNRNPLP14866 589 aaKnown RBP eCLIP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 ARSAP15289 507 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 UGT1A6P19224 532 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 UGT1A1P22309 533 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 UGT1A4P22310 534 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 UGT1A3P35503 534 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 UGT1A5P35504 534 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CBSP35520 551 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 FNDC3BQ53EP0 1204 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 UNC50Q53HI1 259 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TCEAL5Q5H9L2 206 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CES5AQ6NT32 575 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 ANKRD54Q6NXT1 300 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 FRA10AC1Q70Z53 315 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 DPPA4Q7L190 304 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 EFL1Q7Z2Z2 1120 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 LONP2Q86WA8 852 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 GPSM1Q86YR5 675 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CPNE9Q8IYJ1 553 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CLYBLQ8N0X4 340 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TEX9Q8N6V9 391 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TMIEQ8NEW7 156 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 MAPK15Q8TD08 544 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 SORCS1Q8WY21 1168 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 OR8D1Q8WZ84 308 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 PRR11Q96HE9 360 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 MAELQ96JY0 434 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 NUF2Q9BZD4 464 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 SMOXQ9NWM0 555 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 KCTD5Q9NXV2 234 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TNPO3Q9Y5L0 923 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 DNMT3AQ9Y6K1 912 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 KIAA1549LQ6ZVL6 1849 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 MKI67P46013 3256 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 IGLV3-16A0A075B6K0 115 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 NPEPPSL1A6NEC2 478 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 E9PBE3 544 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CDC7O00311 574 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 NEMP1O14524 444 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 KPNA5O15131 536 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 RAD51BO15315 384 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 KLHL41O60662 606 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 SLC25A14O95258 325 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 ADH1BP00325 375 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 ENO3P13929 434 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 TIMP2P16035 220 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 EIF2DP41214 584 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CCR10P46092 362 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 INHBCP55103 352 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 IRX1P78414 480 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 MXRA7P84157 204 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 FCHO2Q0JRZ9 810 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 CDC16Q13042 620 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 LCP2Q13094 533 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 UBAP2LQ14157 1087 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 SNCBQ16143 134 aa10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 PDCD2Q16342 344 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 LSM12Q3MHD2 195 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-203ENST00000448935 ATAT1Q5SQI0 421 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms