RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
VPS52-212ENST00000445902 BEND5Q7L4P6 421 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 PROSER1Q86XN7 944 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 CELF2-AS1Q8N7Q2 184 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 RNF34Q969K3 372 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 OSBPL10Q9BXB5 764 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 LRRC3Q9BY71 257 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 SLIRPQ9GZT3 109 aaKnown RBP13.82□□□□□ -0.2
VPS52-212ENST00000445902 GLOD4Q9HC38 313 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 MAGEE1Q9HCI5 957 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 TRPV5Q9NQA5 729 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 BOLA1Q9Y3E2 137 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 TESMINQ9Y4I5 508 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 TAF4O00268 1085 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 PRMT5O14744 637 aaPredicted RBP13.82□□□□□ -0.2
VPS52-212ENST00000445902 DYRK3O43781 588 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 SSX4O60224 188 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 EEDO75530 441 aaKnown RBP13.82□□□□□ -0.2
VPS52-212ENST00000445902 USP17L7P0C7H9 530 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 DGKQP52824 942 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 NPTX1Q15818 432 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
VPS52-212ENST00000445902 CELF3Q5SZQ8 465 aaKnown RBP13.82□□□□□ -0.2
VPS52-212ENST00000445902 GATAD2AQ86YP4 633 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 FBXO16Q8IX29 292 aaPredicted RBP13.82□□□□□ -0.2
VPS52-212ENST00000445902 TSPAN17Q96FV3 270 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 ZBTB20Q9HC78 741 aaPredicted RBP13.82□□□□□ -0.2
VPS52-212ENST00000445902 CPNE5Q9HCH3 593 aa13.82□□□□□ -0.2
VPS52-212ENST00000445902 HLA-DQB2P05538 268 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 ANXA6P08133 673 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 MASP1P48740 699 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 CLCN5P51795 746 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 CDK5R2Q13319 367 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 C9orf57Q5W0N0 161 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 CATSPERGQ6ZRH7 1159 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 ATPAF2Q8N5M1 289 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 PPP1R13LQ8WUF5 828 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 ZNF300Q96RE9 604 aaPredicted RBP13.81□□□□□ -0.2
VPS52-212ENST00000445902 TBCDQ9BTW9 1192 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 WDCPQ9H6R7 721 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 RGS18Q9NS28 235 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 DDX28Q9NUL7 540 aaKnown RBP13.81□□□□□ -0.2
VPS52-212ENST00000445902 FBXW11Q9UKB1 542 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 KCTD3Q9Y597 815 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 FNDC1Q4ZHG4 1894 aaPredicted RBP13.81□□□□□ -0.2
VPS52-212ENST00000445902 ALOX12P18054 663 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 CD6P30203 668 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 RPL34P49207 117 aaKnown RBP13.81□□□□□ -0.2
VPS52-212ENST00000445902 ARSDP51689 593 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 PPP2R2BQ00005 443 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 EMX2Q04743 252 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 VARS2Q5ST30 1063 aaKnown RBP13.81□□□□□ -0.2
VPS52-212ENST00000445902 LAIR1Q6GTX8 287 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 GPRIN1Q7Z2K8 1008 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 PHF10Q8WUB8 498 aaKnown RBP13.81□□□□□ -0.2
VPS52-212ENST00000445902 LGALS12Q96DT0 336 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 ZHX1-C8orf76Q96EF9 292 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 NECTIN3Q9NQS3 549 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 MAGEL2Q9UJ55 1249 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 UGT2A1Q9Y4X1 527 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 PCDHGA10Q9Y5H3 936 aa13.81□□□□□ -0.2
VPS52-212ENST00000445902 SUPT3HB4E1H0 165 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 GSTA4O15217 222 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 HOXC11O43248 304 aaPredicted RBP13.8□□□□□ -0.2
VPS52-212ENST00000445902 ANXA9O76027 345 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 PRSS23O95084 383 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 KRT8P05787 483 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 PFKLP17858 780 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 PTPRCAPQ14761 206 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 CLCA4Q14CN2 919 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 SYT16Q17RD7 645 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 FBXO47Q5MNV8 452 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 BNIPLQ7Z465 357 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 RAB44Q7Z6P3 723 aaPredicted RBP13.8□□□□□ -0.2
VPS52-212ENST00000445902 OSTM1Q86WC4 334 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 LRRC49Q8IUZ0 686 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 CRYBG2Q8N1P7 616 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 B3GALNT2Q8NCR0 500 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 OR2T11Q8NH01 316 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 MRGPRX2Q96LB1 330 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 CDK5RAP1Q96SZ6 601 aaKnown RBP13.8□□□□□ -0.2
VPS52-212ENST00000445902 COLEC11Q9BWP8 271 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 DUSP16Q9BY84 665 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 SP140LQ9H930 580 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 AIG1Q9NVV5 245 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 RBM22Q9NW64 420 aaKnown RBP eCLIP13.8□□□□□ -0.2
VPS52-212ENST00000445902 NUP214P35658 2090 aaPredicted RBP13.8□□□□□ -0.2
VPS52-212ENST00000445902 ZNF236Q9UL36 1845 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 THSD7AQ9UPZ6 1657 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 BCKDKO14874 412 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 MGEA5O60502 916 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 MT-ND2P03891 347 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 CHRNB1P11230 501 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 CD1DP15813 335 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 NPR3P17342 541 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 MAXP61244 160 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 CDC20Q12834 499 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 SMYD5Q6GMV2 418 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 CILP2Q8IUL8 1156 aa13.8□□□□□ -0.2
VPS52-212ENST00000445902 FNDC5Q8NAU1 212 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms