RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CXCL17Q6UXB2 119 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 CD300LGQ6UXG3 332 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 Q6ZSR9 355 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 NCCRP1Q6ZVX7 275 aaPredicted RBP14.07□□□□□ -0.16
ERCC3-203ENST00000445889 MILR1Q7Z6M3 343 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 IGFN1Q86VF2 1251 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 CCDC117Q8IWD4 279 aaPredicted RBP14.07□□□□□ -0.16
ERCC3-203ENST00000445889 SFRP1Q8N474 314 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 GABPB2Q8TAK5 448 aaPredicted RBP14.07□□□□□ -0.16
ERCC3-203ENST00000445889 ITFG1Q8TB96 612 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 FRS2Q8WU20 508 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 CCDC97Q96F63 343 aaPredicted RBP14.07□□□□□ -0.16
ERCC3-203ENST00000445889 TRIM54Q9BYV2 358 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 ZYG11BQ9C0D3 744 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 CCDC68Q9H2F9 335 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 AIG1Q9NVV5 245 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 CD274Q9NZQ7 290 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 NYNRINQ9P2P1 1898 aaKnown RBP14.07□□□□□ -0.16
ERCC3-203ENST00000445889 MIA3Q5JRA6 1907 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 RALGAPA2Q2PPJ7 1873 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 TNFRSF10BO14763 440 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 GPR182O15218 404 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 DFNA5O60443 496 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 CHRNA1P02708 482 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 CYP2C18P33260 490 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 RGRP47804 291 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 NFKB2Q00653 900 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 AQP6Q13520 282 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 GRB14Q14449 540 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 ZNF773Q6PK81 442 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 IL27RAQ6UWB1 636 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 PLEKHH3Q7Z736 793 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 EFHBQ8N7U6 833 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 ATAD1Q8NBU5 361 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 OR10A6Q8NH74 314 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 HACD3Q9P035 362 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 COMMD10Q9Y6G5 202 aa14.07□□□□□ -0.16
ERCC3-203ENST00000445889 FFAR3O14843 346 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 GPR42O15529 346 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 XPNPEP2O43895 674 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 NDUFS3O75489 264 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 INMTO95050 263 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 GUCA1CO95843 209 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 OPRL1P41146 370 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 STC1P52823 247 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 ERVPABLB-1P60509 514 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 PTGR1Q14914 329 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 IRAK1BP1Q5VVH5 260 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 LETMD1Q6P1Q0 360 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 USP51Q70EK9 711 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 FAM126BQ8IXS8 530 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 PHACTR4Q8IZ21 702 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 CLHC1Q8NHS4 586 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 CCDC138Q96M89 665 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 ZNF599Q96NL3 588 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 C17orf80Q9BSJ5 609 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 THUMPD3Q9BV44 507 aaKnown RBP14.06□□□□□ -0.16
ERCC3-203ENST00000445889 IKZF5Q9H5V7 419 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 LIMD1Q9UGP4 676 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 PCDHB3Q9Y5E6 796 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 OTOFQ9HC10 1997 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 GNGT2O14610 69 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 B4GALT3O60512 393 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 RAMP2O60895 175 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 BMP1P13497 986 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 IDUAP35475 653 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 HALP42357 657 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 RAD23AP54725 363 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 ZNF235Q14590 738 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 TRIM16LQ309B1 348 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 ATP6AP1LQ52LC2 224 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 RFTN2Q52LD8 501 aaPredicted RBP14.06□□□□□ -0.16
ERCC3-203ENST00000445889 PDCD4Q53EL6 469 aaKnown RBP14.06□□□□□ -0.16
ERCC3-203ENST00000445889 BROXQ5VW32 411 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 PSAPL1Q6NUJ1 521 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 SPESP1Q6UW49 350 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 RBM23Q86U06 439 aaKnown RBP14.06□□□□□ -0.16
ERCC3-203ENST00000445889 RSPH1Q8WYR4 309 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 KIAA1191Q96A73 305 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 PRDM8Q9NQV8 689 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 VAPAQ9P0L0 249 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 LEF1Q9UJU2 399 aaPredicted RBP14.06□□□□□ -0.16
ERCC3-203ENST00000445889 TRIM17Q9Y577 477 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 PCDHGC4Q9Y5F7 938 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 ZNF236Q9UL36 1845 aa14.06□□□□□ -0.16
ERCC3-203ENST00000445889 DOCK3Q8IZD9 2030 aa14.05□□□□□ -0.16
ERCC3-203ENST00000445889 MKI67P46013 3256 aaKnown RBP14.05□□□□□ -0.16
ERCC3-203ENST00000445889 LOC285095A0A1B0GVY8 99 aa14.05□□□□□ -0.16
ERCC3-203ENST00000445889 ZBBXA8MT70 800 aa14.05□□□□□ -0.16
ERCC3-203ENST00000445889 KERAO60938 352 aa14.05□□□□□ -0.16
ERCC3-203ENST00000445889 RPP40O75818 363 aaKnown RBP14.05□□□□□ -0.16
ERCC3-203ENST00000445889 CLPXO76031 633 aa14.05□□□□□ -0.16
ERCC3-203ENST00000445889 PAPSS2O95340 614 aaPredicted RBP14.05□□□□□ -0.16
ERCC3-203ENST00000445889 CAPN1P07384 714 aa14.05□□□□□ -0.16
ERCC3-203ENST00000445889 THRBP10828 461 aa14.05□□□□□ -0.16
ERCC3-203ENST00000445889 GDF5P43026 501 aa14.05□□□□□ -0.16
ERCC3-203ENST00000445889 EIF2B2P49770 351 aaKnown RBP14.05□□□□□ -0.16
ERCC3-203ENST00000445889 TSPY1Q01534 308 aa14.05□□□□□ -0.16
ERCC3-203ENST00000445889 PCBP1Q15365 356 aaKnown RBP eCLIP14.05□□□□□ -0.16
ERCC3-203ENST00000445889 CTU2Q2VPK5 515 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms