RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 BDNFP23560 247 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 BMPR1AP36894 532 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 PHC1P78364 1004 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 ZNF33AQ06730 810 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 PIGFQ07326 219 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 FXNQ16595 210 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 MEP1AQ16819 746 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 GEN1Q17RS7 908 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 ADPRMQ3LIE5 342 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 XKR4Q5GH76 650 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 ZNF678Q5SXM1 525 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 KIAA0319Q5VV43 1072 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 SLX4IPQ5VYV7 408 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 ESRP1Q6NXG1 681 aaKnown RBP11.78□□□□□ -0.52
LTBR-203ENST00000441074 STK32CQ86UX6 486 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 OSTM1Q86WC4 334 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 PHYKPLQ8IUZ5 450 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 TOP6BLQ8N6T0 577 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 OR13J1Q8NGT2 312 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 RHOXF1Q8NHV9 184 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 TMBIM1Q969X1 311 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 TRIM8Q9BZR9 551 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 POLE4Q9NR33 117 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 PIGVQ9NUD9 493 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 FBXO5Q9UKT4 447 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 TESMINQ9Y4I5 508 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 DNAJC15Q9Y5T4 150 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 PMF1-BGLAPU3KQ54 211 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 SYNJ2BP-COX16A0A087WUM0 186 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 CENPBD1B2RD01 187 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 C9JVG2 144 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 AXIN1O15169 862 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 RFPL2O75678 378 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 SOAT2O75908 522 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 BEST1O76090 585 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 SUPT7LO94864 414 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 ITGB1P05556 798 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 GSNP06396 782 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 FGF4P08620 206 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 CKBP12277 381 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 TCF3P15923 654 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 POLR2EP19388 210 aaKnown RBP11.78□□□□□ -0.52
LTBR-203ENST00000441074 HRH2P25021 359 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 CD40LGP29965 261 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 TPD52P55327 224 aaPredicted RBP11.78□□□□□ -0.52
LTBR-203ENST00000441074 PITX1P78337 314 aaPredicted RBP11.78□□□□□ -0.52
LTBR-203ENST00000441074 GRB7Q14451 532 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 ACOX1Q15067 660 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 RPS6KA2Q15349 733 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 UNC50Q53HI1 259 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 FAM219BQ5XKK7 198 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 CCDC117Q8IWD4 279 aaPredicted RBP11.78□□□□□ -0.52
LTBR-203ENST00000441074 PCSK9Q8NBP7 692 aaKnown RBP11.78□□□□□ -0.52
LTBR-203ENST00000441074 ZNF555Q8NEP9 628 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 NDNFQ8TB73 568 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 DYNC2LI1Q8TCX1 351 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.78□□□□□ -0.525e-6■□□□□ 8.2
LTBR-203ENST00000441074 COX16Q9P0S2 106 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 PCDHGB1Q9Y5G3 927 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 SCN10AQ9Y5Y9 1956 aa11.78□□□□□ -0.52
LTBR-203ENST00000441074 TTC34A8MYJ7 566 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 FAM72CH0Y354 149 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 SNPHO15079 494 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 DYRK3O43781 588 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 B4GALT3O60512 393 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 TULP3O75386 442 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 S100BP04271 92 aaPredicted RBP11.77□□□□□ -0.52
LTBR-203ENST00000441074 LBPP18428 481 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 TSPAN8P19075 237 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 NR4A2P43354 598 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 MAPK11Q15759 364 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 CTU2Q2VPK5 515 aaKnown RBP11.77□□□□□ -0.52
LTBR-203ENST00000441074 RBM20Q5T481 1227 aaKnown RBP11.77□□□□□ -0.52
LTBR-203ENST00000441074 FAM72AQ5TYM5 149 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 ZNF470Q6ECI4 717 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 FAM72DQ6L9T8 149 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 RTN4RL1Q86UN2 441 aaPredicted RBP11.77□□□□□ -0.52
LTBR-203ENST00000441074 FAM72BQ86X60 149 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 GALNT13Q8IUC8 556 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 LRRC49Q8IUZ0 686 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 ELMOD1Q8N336 334 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 Q8N9G6 341 aaPredicted RBP11.77□□□□□ -0.52
LTBR-203ENST00000441074 PPHLN1Q8NEY8 458 aaKnown RBP11.77□□□□□ -0.52
LTBR-203ENST00000441074 CHAC2Q8WUX2 184 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 PGAP3Q96FM1 320 aaPredicted RBP11.77□□□□□ -0.52
LTBR-203ENST00000441074 PPP1R2P1Q96PQ5 205 aa11.77□□□□□ -0.52
LTBR-203ENST00000441074 GPR182O15218 404 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 JCHAINP01591 159 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 THP07101 528 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 ACVR2AP27037 513 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 EIF2DP41214 584 aaKnown RBP11.77□□□□□ -0.53
LTBR-203ENST00000441074 ALDH7A1P49419 539 aaKnown RBP11.77□□□□□ -0.53
LTBR-203ENST00000441074 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.53
LTBR-203ENST00000441074 SH3BP2P78314 561 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 CD47Q08722 323 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 POU6F1Q14863 301 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 SLC14A2Q15849 920 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 TRIM71Q2Q1W2 868 aaKnown RBP11.77□□□□□ -0.53
LTBR-203ENST00000441074 LAIR2Q6ISS4 152 aa11.77□□□□□ -0.53
LTBR-203ENST00000441074 BEND5Q7L4P6 421 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms