RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 BASP1P80723 227 aaKnown RBP10.3□□□□□ -0.76
MCF2L-216ENST00000439475 XIAPP98170 497 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 ZFP36L1Q07352 338 aaKnown RBP10.3□□□□□ -0.76
MCF2L-216ENST00000439475 DMPKQ09013 629 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 NFATC2Q13469 925 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 SEMA5AQ13591 1074 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 SIX1Q15475 284 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-216ENST00000439475 PLA2G4EQ3MJ16 856 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 KHDC1Q4VXA5 237 aaKnown RBP10.3□□□□□ -0.76
MCF2L-216ENST00000439475 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-216ENST00000439475 TMEM164Q5U3C3 297 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 AGAP9Q5VTM2 703 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 TMEM71Q6P5X7 295 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 NLRP9Q7RTR0 991 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 TAS2R42Q7RTR8 314 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 RASGEF1AQ8N9B8 481 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 SNIP1Q8TAD8 396 aaKnown RBP10.3□□□□□ -0.76
MCF2L-216ENST00000439475 CXorf40BQ96DE9 158 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 SLC46A1Q96NT5 459 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 FOXP3Q9BZS1 431 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 VPS37BQ9H9H4 285 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 POT1Q9NUX5 634 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 TRMT1Q9NXH9 659 aaKnown RBP10.3□□□□□ -0.76
MCF2L-216ENST00000439475 ZDHHC3Q9NYG2 299 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 SLC23A2Q9UGH3 650 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 ACSL5Q9ULC5 683 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 RAXQ9Y2V3 346 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 KCTD3Q9Y597 815 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 A0A087WV48 116 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 GOLGA6L10A0A0M3HER8 536 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 MGAT4DA6NG13 374 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 HGSO14964 777 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 EML2O95834 649 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 ATP1B2P14415 290 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 ETS1P14921 441 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 CSTF2P33240 577 aaKnown RBP eCLIP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 RPL22P35268 128 aaKnown RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 EIF2S3P41091 472 aaKnown RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 KCNJ1P48048 391 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 NPY2RP49146 381 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 ZNF140P52738 457 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 LIMK2P53671 638 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 PCBP4P57723 403 aaKnown RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 CDK16Q00536 496 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 CACNG1Q06432 222 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 SEPT7Q16181 437 aaKnown RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 FNBP1LQ5T0N5 605 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 BROXQ5VW32 411 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 LYPLAL1Q5VWZ2 237 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 TMEM26Q6ZUK4 368 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 B3GNT8Q7Z7M8 397 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 ZNF547Q8IVP9 402 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 REXO1L1PQ8IX06 675 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 NXPE1Q8N323 547 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 SLC35F6Q8N357 371 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 RASGEF1CQ8N431 466 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 PPHLN1Q8NEY8 458 aaKnown RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 OR4D9Q8NGE8 314 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 NCSTNQ92542 709 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 PEX13Q92968 403 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 MAGOHBQ96A72 148 aaKnown RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 SGF29Q96ES7 293 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 DNAJC1Q96KC8 554 aaKnown RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 LINC00615Q96LM1 132 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 RANBP9Q96S59 729 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 UCK1Q9HA47 277 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 RDH14Q9HBH5 336 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 CASS4Q9NQ75 786 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 EIF2B3Q9NR50 452 aaKnown RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 BFARQ9NZS9 450 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 ANAPC5Q9UJX4 755 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 RIMKLBQ9ULI2 386 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 TTC7AQ9ULT0 858 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-216ENST00000439475 LOXL2Q9Y4K0 774 aa10.29□□□□□ -0.76
MCF2L-216ENST00000439475 C17orf113A0A1B0GUU1 675 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 A6NCN8 305 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 LILRA5A6NI73 299 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 CES2O00748 559 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 GAPDHSO14556 408 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-216ENST00000439475 TLX3O43711 291 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-216ENST00000439475 ITGA2BP08514 1039 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 GSTM1P09488 218 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 ZSCAN5DPP0CG00 497 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 TCP1P17987 556 aaKnown RBP10.28□□□□□ -0.76
MCF2L-216ENST00000439475 RPL10P27635 214 aaKnown RBP10.28□□□□□ -0.76
MCF2L-216ENST00000439475 PBLDP30039 288 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-216ENST00000439475 SLC19A1P41440 591 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 ABCG1P45844 678 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 MAPK9P45984 424 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 CTSCP53634 463 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 PRAMEP78395 509 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 GSTM4Q03013 218 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 ITIH4Q14624 930 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 GSE1Q14687 1217 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 BCL7AQ4VC05 210 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 PCID2Q5JVF3 399 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 TSTD2Q5T7W7 516 aa10.28□□□□□ -0.76
MCF2L-216ENST00000439475 KLHL35Q6PF15 583 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms