RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PCDHAC1Q9H158 963 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 RNF112Q9ULX5 631 aa13.75□□□□□ -0.21
PTCHD3-201ENST00000438700 XYLBO75191 536 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 PRAMEF12O95522 483 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 DDX6P26196 483 aaKnown RBP eCLIP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 HOXA9P31269 272 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 LMAN2Q12907 356 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 STX5Q13190 355 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 TSNQ15631 228 aaKnown RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 KIF19Q2TAC6 998 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 UGT3A2Q3SY77 523 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 SETMARQ53H47 684 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 INO80DQ53TQ3 878 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 MPP7Q5T2T1 576 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 ATXN7L2Q5T6C5 722 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 PSAPL1Q6NUJ1 521 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 AFTPHQ6ULP2 937 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 GRASPQ7Z6J2 395 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 RAB44Q7Z6P3 723 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 TICAM1Q8IUC6 712 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 DDIASQ8IXT1 998 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 SLC30A3Q99726 388 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 C2orf49Q9BVC5 232 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 AKTIPQ9H8T0 292 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 SEMA4BQ9NPR2 832 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 TAS2R13Q9NYV9 303 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 C6orf203Q9P0P8 240 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 FKBPLQ9UIM3 349 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 BTRCQ9Y297 605 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 RAI2Q9Y5P3 530 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 CEPT1Q9Y6K0 416 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 C2orf81A6NN90 581 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 PIP5K1BO14986 540 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 BCAS2O75934 225 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 TNFAIP8O95379 198 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 SNRPB2P08579 225 aaKnown RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 HNRNPA1P09651 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 CES1P23141 567 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 EEF1DP29692 281 aaKnown RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 CD70P32970 193 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 LRP8Q14114 963 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 TAF1AQ15573 450 aaPredicted RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 PTPRNQ16849 979 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 CLYBLQ8N0X4 340 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 TWIST2Q8WVJ9 160 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 SLC45A3Q96JT2 553 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 MRPS26Q9BYN8 205 aaKnown RBP13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 CERS4Q9HA82 394 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 TMEM165Q9HC07 324 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 TDP1Q9NUW8 608 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 HCFC2Q9Y5Z7 792 aa13.74□□□□□ -0.21
PTCHD3-201ENST00000438700 C7orf72A4D263 438 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 NPEPPSL1A6NEC2 478 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 CDC7O00311 574 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ACOT8O14734 319 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 MRASO14807 208 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 NIPSNAP2O75323 286 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ATP6V1G1O75348 118 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 TRMUO75648 421 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 RNASEH2AO75792 299 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 CYBBP04839 570 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 CDH2P19022 906 aaPredicted RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 STT3AP46977 705 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ECT2LQ008S8 904 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 TRAF2Q12933 501 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 GPM6BQ13491 265 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 APOFQ13790 326 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 MAPRE2Q15555 327 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 RARS2Q5T160 578 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 FIBINQ8TAL6 211 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ING5Q8WYH8 240 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 PLEKHG4BQ96PX9 1271 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 TM6SF2Q9BZW4 377 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 INTS10Q9NVR2 710 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 TSR3Q9UJK0 312 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 RAB26Q9ULW5 256 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ARIH1Q9Y4X5 557 aaPredicted RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 PRRC2BQ5JSZ5 2229 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 BTN3A1O00481 513 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 TRIM38O00635 465 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 SMAD6O43541 496 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 FOXD2O60548 495 aaPredicted RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 FAM58BPP0C7Q3 252 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 LINC00032P0C843 101 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 HOXB8P17481 243 aaPredicted RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 MC4RP32245 332 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 STX1BP61266 288 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 GRB7Q14451 532 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 SHHQ15465 462 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ZRANB3Q5FWF4 1079 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 PITRM1Q5JRX3 1037 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 PRSS36Q5K4E3 855 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 RETSATQ6NUM9 610 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 NCEH1Q6PIU2 408 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ADGRD2Q7Z7M1 963 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 AHI1Q8N157 1196 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 FBXO39Q8N4B4 442 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 SIDT2Q8NBJ9 832 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 RHEBL1Q8TAI7 183 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms