RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 USP7Q93009 1102 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 FKBPLQ9UIM3 349 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 CRLS1Q9UJA2 301 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 PCDHB11Q9Y5F2 797 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 PCDHGA7Q9Y5G6 932 aa20.34■□□□□ 0.85
HSPG2-205ENST00000427897 OR2AG2A6NM03 316 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 A8MU76 341 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 HGSO14964 777 aaPredicted RBP20.33■□□□□ 0.85
HSPG2-205ENST00000427897 POP7O75817 140 aaKnown RBP20.33■□□□□ 0.85
HSPG2-205ENST00000427897 METTL18O95568 372 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 IFNB1P01574 187 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 AMD1P17707 334 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 XRCC1P18887 633 aaPredicted RBP20.33■□□□□ 0.85
HSPG2-205ENST00000427897 EPHA4P54764 986 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 CCZ1BP86790 482 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 CCZ1P86791 482 aaPredicted RBP20.33■□□□□ 0.85
HSPG2-205ENST00000427897 SQSTM1Q13501 440 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 SNX1Q13596 522 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 SEPT6Q14141 434 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 C16orf72Q14CZ0 275 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 FNBP1LQ5T0N5 605 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 MEI1Q5TIA1 1274 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 DET1Q7L5Y6 550 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 GPR155Q7Z3F1 870 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 LINC00523Q86TU6 105 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 SLC13A5Q86YT5 568 aaPredicted RBP20.33■□□□□ 0.85
HSPG2-205ENST00000427897 ZNF547Q8IVP9 402 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 RASGEF1AQ8N9B8 481 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 AGBL5Q8NDL9 886 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 DDHD1Q8NEL9 900 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 ATG4AQ8WYN0 398 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 ZNF514Q96K75 400 aaPredicted RBP20.33■□□□□ 0.85
HSPG2-205ENST00000427897 EPB41L1Q9H4G0 881 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 ARNT2Q9HBZ2 717 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 KCTD3Q9Y597 815 aa20.33■□□□□ 0.85
HSPG2-205ENST00000427897 DNMT3AQ9Y6K1 912 aaPredicted RBP20.33■□□□□ 0.85
HSPG2-205ENST00000427897 ACACAQ13085 2346 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 KIF26BQ2KJY2 2108 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 A6NCN8 305 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 NVLO15381 856 aaKnown RBP20.32■□□□□ 0.84
HSPG2-205ENST00000427897 GPR39O43194 453 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 TPH1P17752 444 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 ITGALP20701 1170 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 DRG2P55039 364 aaKnown RBP20.32■□□□□ 0.84
HSPG2-205ENST00000427897 ABRAXAS1Q6UWZ7 409 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 FAM129CQ86XR2 697 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 CCDC89Q8N998 374 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 DNAAF3Q8N9W5 541 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 OR13C4Q8NGS5 318 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 C1orf54Q8WWF1 131 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 ULK4Q96C45 1275 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 TBC1D10AQ9BXI6 508 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 ZZEF1O43149 2961 aa20.32■□□□□ 0.84
HSPG2-205ENST00000427897 CFAP99D6REC4 459 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 LIASO43766 372 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 GDF10P55107 478 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 ZRANB3Q5FWF4 1079 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 WDR74Q6RFH5 385 aaPredicted RBP20.31■□□□□ 0.84
HSPG2-205ENST00000427897 PPP1R21Q6ZMI0 780 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 PLXDC1Q8IUK5 500 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 TRIM58Q8NG06 486 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 HEXDCQ8WVB3 486 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 MAIP1Q8WWC4 291 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 FAM96AQ9H5X1 160 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 PRORYQ9H606 182 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 POT1Q9NUX5 634 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 SMOXQ9NWM0 555 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 TMEM9Q9P0T7 183 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 SCHIP1Q9P0W5 487 aaPredicted RBP20.31■□□□□ 0.84
HSPG2-205ENST00000427897 KLHL3Q9UH77 587 aa20.31■□□□□ 0.84
HSPG2-205ENST00000427897 PRAMEF33A0A0G2JMD5 474 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 PRAMEF10O60809 474 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 CCL4P13236 92 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 CSF2RBP32927 897 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 FDFT1P37268 417 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 ETV5P41161 510 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 SLC19A1P41440 591 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 POU6F1Q14863 301 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 ARHGAP40Q5TG30 622 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 AGAP9Q5VTM2 703 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 DENND5AQ6IQ26 1287 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 WASH2PQ6VEQ5 465 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 CCDC81Q6ZN84 652 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 TAS2R42Q7RTR8 314 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 SGF29Q96ES7 293 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 TAAR9Q96RI9 348 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 CPNE5Q9HCH3 593 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 WASH6PQ9NQA3 447 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 SLC39A1Q9NY26 324 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 ZNF624Q9P2J8 865 aaPredicted RBP20.3■□□□□ 0.84
HSPG2-205ENST00000427897 FAM8A1Q9UBU6 413 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 PSMD13Q9UNM6 376 aa20.3■□□□□ 0.84
HSPG2-205ENST00000427897 APC2O95996 2303 aa20.29■□□□□ 0.84
HSPG2-205ENST00000427897 LILRA5A6NI73 299 aa20.29■□□□□ 0.84
HSPG2-205ENST00000427897 OR52A4PA6NMU1 304 aa20.29■□□□□ 0.84
HSPG2-205ENST00000427897 GAPDHSO14556 408 aaPredicted RBP20.29■□□□□ 0.84
HSPG2-205ENST00000427897 UBXN7O94888 489 aa20.29■□□□□ 0.84
HSPG2-205ENST00000427897 AP2A1O95782 977 aa20.29■□□□□ 0.84
HSPG2-205ENST00000427897 THRAP10827 490 aa20.29■□□□□ 0.84
HSPG2-205ENST00000427897 TYRP1P17643 537 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms