RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PYGMP11217 842 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 NR1D1P20393 614 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 GNLYP22749 145 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 FECHP22830 423 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 LEPRP48357 1165 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 HSD11B2P80365 405 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SLC25A11Q02978 314 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 NIPAL4Q0D2K0 466 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 XRCC4Q13426 336 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 DPYSL3Q14195 570 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ELOAQ14241 798 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 GPR18Q14330 331 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 GSE1Q14687 1217 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 PDK1Q15118 436 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 PLA2G4EQ3MJ16 856 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 FIGNQ5HY92 759 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 DNTTIP2Q5QJE6 756 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 LDLRAP1Q5SW96 308 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ALKBH5Q6P6C2 394 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 H2AFVQ71UI9 128 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 OOSP2Q86WS3 158 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CARFQ8N187 725 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ZFPM2Q8WW38 1151 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CTNNBL1Q8WYA6 563 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ZNF514Q96K75 400 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SMIM14Q96QK8 99 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 WDR24Q96S15 920 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ING2Q9H160 280 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SYTL2Q9HCH5 934 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ARFGAP3Q9NP61 516 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 FGF21Q9NSA1 209 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 HEY1Q9Y5J3 304 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SLC30A1Q9Y6M5 507 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SCN8AQ9UQD0 1980 aa12.04□□□□□ -0.48
HLA-DQB3-203ENST00000425319 LRP4O75096 1905 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SCRG1O75711 98 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ZBTB11O95625 1053 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CYP1A2P05177 515 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 IL4RP24394 825 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 DRG2P55039 364 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ADCY2Q08462 1091 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ITGA9Q13797 1035 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 GALNT3Q14435 633 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 PPP2R5EQ16537 467 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 PCSK7Q16549 785 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 TXNRD3NBQ6F5E7 133 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CAPRIN2Q6IMN6 1127 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CLEC17AQ6ZS10 378 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 MED25Q71SY5 747 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 GPR26Q8NDV2 337 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 FAM71BQ8TC56 605 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CPT1BQ92523 772 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CLIP3Q96DZ5 547 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 VPS35Q96QK1 796 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 FERMT1Q9BQL6 677 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 BPIFA3Q9BQP9 254 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SLC25A51Q9H1U9 297 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 HRASLS2Q9NWW9 162 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SOHLH2Q9NX45 425 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 OGFRQ9NZT2 677 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 HACD3Q9P035 362 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SCHIP1Q9P0W5 487 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 UVRAGQ9P2Y5 699 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 NFKBIL1Q9UBC1 381 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SERTAD3Q9UJW9 196 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SNX7Q9UNH6 387 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 PKP3Q9Y446 797 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ZNF711Q9Y462 761 aa12.03□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ANKRD36A6QL64 1941 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SSU72P8A0A1W2PR75 194 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ARGFXA6NJG6 315 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 OR52A4PA6NMU1 304 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 KCNK1O00180 336 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MATN2O00339 956 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 APOL1O14791 398 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 KIF1CO43896 1103 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 POP7O75817 140 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NDST3O95803 873 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HBQ1P09105 142 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CD48P09326 243 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TCF4P15884 667 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MSH3P20585 1137 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 AGXTP21549 392 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LPOP22079 712 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NDUFS1P28331 727 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TUBB4BP68371 445 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IFI35P80217 286 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PPIDQ08752 370 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TUBB2AQ13885 445 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SLC14A2Q15849 920 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LONRF2Q1L5Z9 754 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZNF648Q5T619 568 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PWWP2BQ6NUJ5 590 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HOOK3Q86VS8 718 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TTC30BQ8N4P2 665 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TMEM102Q8N9M5 508 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PRR7Q8TB68 274 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RSC1A1Q92681 617 aa12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 N4BP2L2Q92802 583 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SGSM3Q96HU1 749 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms