RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SYT2Q8N9I0 419 aaPredicted RBP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 EIF1ADQ8N9N8 165 aaKnown RBP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 TC2NQ8N9U0 490 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 MIGA1Q8NAN2 632 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 MCPH1Q8NEM0 835 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 OR4N2Q8NGD1 307 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 AGAP11Q8TF27 550 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 GDPD5Q8WTR4 605 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 HERVK_113Q902F9 699 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 ATP6V0A1Q93050 837 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 PHF21BQ96EK2 531 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 C8orf76Q96K31 380 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 NR1H4Q96RI1 486 aaPredicted RBP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 LLPHQ9BRT6 129 aaKnown RBP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 INTS2Q9H0H0 1204 aaKnown RBP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 RAB17Q9H0T7 212 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 HAUS4Q9H6D7 363 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 RETREG1Q9H6L5 497 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 PARVBQ9HBI1 364 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 WDR6Q9NNW5 1121 aaKnown RBP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 LZTFL1Q9NQ48 299 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 UBAP1Q9NZ09 502 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 NDUFA13Q9P0J0 144 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 TBC1D7Q9P0N9 293 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 CFDP1Q9UEE9 299 aaPredicted RBP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 RABL2BQ9UNT1 228 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 ITM2BQ9Y287 266 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 L3MBTL1Q9Y468 752 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 TTLL3Q9Y4R7 772 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 LRRC42Q9Y546 428 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 SAR1BQ9Y6B6 198 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 PTPRTO14522 1441 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 TROQ12816 1431 aaPredicted RBP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 POGZQ7Z3K3 1410 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 NSD3Q9BZ95 1437 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 ITIH6Q6UXX5 1313 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 TARBP1Q13395 1621 aaKnown RBP3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 ABCA6Q8N139 1617 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 MADDQ8WXG6 1647 aa3.41□□□□□ -1.86
SDCBPP3-201ENST00000419629 ADCY9O60503 1353 aa3.4□□□□□ -1.86
SDCBPP3-201ENST00000419629 JCADQ9P266 1359 aa3.4□□□□□ -1.86
SDCBPP3-201ENST00000419629 ABCC6O95255 1503 aa3.4□□□□□ -1.86
SDCBPP3-201ENST00000419629 FAM90A7PA6NKC0 464 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAM90A22PA8MWA6 464 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAM90A12PA8MX19 464 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAM90A23PA8MXZ1 464 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 INAFM1C9JVW0 142 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 SPECC1L-ADORA2AF8WAN1 911 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 DNM1LO00429 736 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 NTN3O00634 580 aaPredicted RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 TSPAN4O14817 238 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 LSM1O15116 133 aaKnown RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 SLC25A17O43808 307 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 ZFYP08048 801 aaPredicted RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 GLI2P10070 1586 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 SLC2A4P14672 509 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 POLR2EP19388 210 aaKnown RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 COPB2P35606 906 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 ARL1P40616 181 aaPredicted RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 PIP4K2AP48426 406 aaPredicted RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 AMTP48728 403 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 PCYT1AP49585 367 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 TUBA1BP68363 451 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 SLC18A2Q05940 514 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAM27E3Q08E93 113 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 RUNX2Q13950 521 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 KRT32Q14532 448 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 NDUFA5Q16718 116 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 PARP10Q53GL7 1025 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 EFHC1Q5JVL4 640 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 AGBL2Q5U5Z8 902 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 ADALQ6DHV7 355 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 NAPEPLDQ6IQ20 393 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 C8orf82Q6P1X6 216 aaPredicted RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 TMEM53Q6P2H8 277 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 KLHL24Q6TFL4 600 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 CD109Q6YHK3 1445 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 TUBA1AQ71U36 451 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 CPLX4Q7Z7G2 160 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 CROCCP2Q86T23 111 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 HOOK3Q86VS8 718 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 CROCCP3Q8IVE0 287 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 SAMD9LQ8IVG5 1584 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 IFT20Q8IY31 132 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 ST13P4Q8IZP2 240 aaPredicted RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 TRIML1Q8N9V2 468 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 MLKLQ8NB16 471 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 C11orf65Q8NCR3 313 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 LMO3Q8TAP4 145 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 ZCCHC10Q8TBK6 192 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 TRPC4APQ8TEL6 797 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 ATP8B4Q8TF62 1192 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 DNAJC9Q8WXX5 260 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 CASP10Q92851 521 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 CENPTQ96BT3 561 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 CHMP6Q96FZ7 201 aa3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 MAELQ96JY0 434 aaKnown RBP3.4□□□□□ -1.87
SDCBPP3-201ENST00000419629 EYA3Q99504 573 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms