RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 LINC00523Q86TU6 105 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 ZNF547Q8IVP9 402 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 DNAAF3Q8N9W5 541 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 OR4D9Q8NGE8 314 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 ZNF398Q8TD17 642 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 C1orf54Q8WWF1 131 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 RTP4Q96DX8 246 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 CCDC97Q96F63 343 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 PRR11Q96HE9 360 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 ZNF514Q96K75 400 aaPredicted RBP12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 CCDC74BQ96LY2 380 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 DPYSL5Q9BPU6 564 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 ARNT2Q9HBZ2 717 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 CPNE7Q9UBL6 633 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 PISDQ9UG56 409 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 SLC23A2Q9UGH3 650 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 SLC30A1Q9Y6M5 507 aa12.53□□□□□ -0.4
HMGN1P4-201ENST00000419500 IGHV5-10-1A0A0J9YXX1 117 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 CDRT15L2A8MXV6 281 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 HGSO14964 777 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 VIPP01282 170 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 ITIH1P19827 911 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 RPL10P27635 214 aaKnown RBP12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 ITPKBP27987 946 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 PBLDP30039 288 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 CSF2RBP32927 897 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 ZNF140P52738 457 aaPredicted RBP12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 LIMK2P53671 638 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 EPHA4P54764 986 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 DRG2P55039 364 aaKnown RBP12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 TRA2AQ13595 282 aaKnown RBP eCLIP12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 POU6F1Q14863 301 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 FNBP1LQ5T0N5 605 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 DET1Q7L5Y6 550 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 CLEC14AQ86T13 490 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 AMZ2Q86W34 360 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 SPACA3Q8IXA5 215 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 RASGEF1AQ8N9B8 481 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 RCBTB1Q8NDN9 531 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 MAIP1Q8WWC4 291 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 ULK4Q96C45 1275 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 CXorf40BQ96DE9 158 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 DCUN1D1Q96GG9 259 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 C19orf43Q9BQ61 176 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 POT1Q9NUX5 634 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 WDR70Q9NW82 654 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 PIH1D1Q9NWS0 290 aaKnown RBP12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 KCTD3Q9Y597 815 aa12.52□□□□□ -0.41
HMGN1P4-201ENST00000419500 ZFYVE26Q68DK2 2539 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 ADAMTS20P59510 1910 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 LILRA5A6NI73 299 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 ERI2A8K979 691 aaKnown RBP12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 CFAP99D6REC4 459 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 KLK10O43240 276 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 LDB2O43679 373 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 KCNJ13O60928 360 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 POP7O75817 140 aaKnown RBP12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 FGGP02679 453 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 MPSTP25325 297 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 MC4RP32245 332 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 CSTF2P33240 577 aaKnown RBP eCLIP12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 FDFT1P37268 417 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 MAPK10P53779 464 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 UBE2IP63279 158 aaKnown RBP12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 TLE3Q04726 772 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 CDH17Q12864 832 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 SQSTM1Q13501 440 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 TMEM164Q5U3C3 297 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 AGAP9Q5VTM2 703 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 TMEM220Q6QAJ8 160 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 WDR74Q6RFH5 385 aaPredicted RBP12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 PPP1R21Q6ZMI0 780 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 GSTA5Q7RTV2 222 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 SNX20Q7Z614 316 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 C11orf96Q7Z7L8 435 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 NCSTNQ92542 709 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 DNAJC1Q96KC8 554 aaKnown RBP12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 COPS8Q99627 209 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 DPH1Q9BZG8 443 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 EPB41L1Q9H4G0 881 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 RAB6BQ9NRW1 208 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 PAK5Q9P286 719 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 RALYQ9UKM9 306 aaKnown RBP12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 ZKSCAN5Q9Y2L8 839 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 PCDHGA7Q9Y5G6 932 aa12.51□□□□□ -0.41
HMGN1P4-201ENST00000419500 KLHL33A6NCF5 533 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 OR52A4PA6NMU1 304 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 CCL22O00626 93 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 CEP104O60308 925 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 THRAP10827 490 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 HOXB3P14651 431 aaPredicted RBP12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 TPH1P17752 444 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 XRCC1P18887 633 aaPredicted RBP12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 SLC5A2P31639 672 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 CXCR5P32302 372 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 CA5AP35218 305 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 CTSCP53634 463 aa12.5□□□□□ -0.41
HMGN1P4-201ENST00000419500 UCNP55089 124 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms