RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 B3GNT4Q9C0J1 378 aa14.86□□□□□ -0.03
UBXN4-203ENST00000416538 TRABDQ9H4I3 376 aa14.86□□□□□ -0.03
UBXN4-203ENST00000416538 UGT1A7Q9HAW7 530 aa14.86□□□□□ -0.03
UBXN4-203ENST00000416538 UGT1A10Q9HAW8 530 aa14.86□□□□□ -0.03
UBXN4-203ENST00000416538 UGT1A8Q9HAW9 530 aa14.86□□□□□ -0.03
UBXN4-203ENST00000416538 SIDT1Q9NXL6 827 aaKnown RBP14.86□□□□□ -0.03
UBXN4-203ENST00000416538 KCTD3Q9Y597 815 aa14.86□□□□□ -0.03
UBXN4-203ENST00000416538 ARL5AQ9Y689 179 aa14.86□□□□□ -0.03
UBXN4-203ENST00000416538 SPTA1P02549 2419 aa14.86□□□□□ -0.03
UBXN4-203ENST00000416538 PDZK1P1A8MUH7 402 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 BTNL10A8MVZ5 291 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 B4E171 279 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 KMOO15229 486 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 SNRNP200O75643 2136 aaKnown RBP14.85□□□□□ -0.03
UBXN4-203ENST00000416538 PYGMP11217 842 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 SPTBP11277 2137 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 XRCC1P18887 633 aaPredicted RBP14.85□□□□□ -0.03
UBXN4-203ENST00000416538 CD82P27701 267 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 CSTF2P33240 577 aaKnown RBP eCLIP14.85□□□□□ -0.03
UBXN4-203ENST00000416538 TSPAN7P41732 249 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 VAV2P52735 878 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 C19orf57Q0VDD7 668 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 TMEM115Q12893 351 aaPredicted RBP14.85□□□□□ -0.03
UBXN4-203ENST00000416538 CLCA4Q14CN2 919 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 MANEAQ5SRI9 462 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 GPRC6AQ5T6X5 926 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 CCDC70Q6NSX1 233 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 TMEM26Q6ZUK4 368 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 TRAPPC5Q8IUR0 188 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 TMTC1Q8IUR5 882 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 EXD3Q8N9H8 876 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 DDHD1Q8NEL9 900 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 CCDC110Q8TBZ0 833 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 RTP4Q96DX8 246 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 SGF29Q96ES7 293 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 SRPK1Q96SB4 655 aaKnown RBP14.85□□□□□ -0.03
UBXN4-203ENST00000416538 CTRCQ99895 268 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 DESI2Q9BSY9 194 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 SPRY4Q9C004 299 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 SLC39A1Q9NY26 324 aa14.85□□□□□ -0.03
UBXN4-203ENST00000416538 AKAP7Q9P0M2 348 aaPredicted RBP14.85□□□□□ -0.03
UBXN4-203ENST00000416538 PACSIN2Q9UNF0 486 aaPredicted RBP14.85□□□□□ -0.03
UBXN4-203ENST00000416538 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.85□□□□□ -0.03
UBXN4-203ENST00000416538 GLYATL1P3A0A0U1RQE8 302 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 OR5K4A6NMS3 321 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 STMND1H3BQB6 276 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 ZW10O43264 779 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 C9P02748 559 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 RBP3P10745 1247 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 PLA2G2AP14555 144 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 SLC2A4P14672 509 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 TYRP1P17643 537 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 LEPRP48357 1165 aaKnown RBP14.84□□□□□ -0.03
UBXN4-203ENST00000416538 PPM1FP49593 454 aaPredicted RBP14.84□□□□□ -0.03
UBXN4-203ENST00000416538 EIF3EP60228 445 aaKnown RBP14.84□□□□□ -0.03
UBXN4-203ENST00000416538 COPS2P61201 443 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 PPP1CAP62136 330 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 PDAP1Q13442 181 aaKnown RBP14.84□□□□□ -0.03
UBXN4-203ENST00000416538 ANKRD20A2Q5SQ80 823 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 ANKRD20A1Q5TYW2 823 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 ANKRD20A3Q5VUR7 823 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 DENND5AQ6IQ26 1287 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 ABRAXAS1Q6UWZ7 409 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 RANBP10Q6VN20 620 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 DTX3LQ8TDB6 740 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 EXTL1Q92935 676 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 FSD1LQ9BXM9 530 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 STN1Q9H668 368 aaKnown RBP14.84□□□□□ -0.03
UBXN4-203ENST00000416538 UCK1Q9HA47 277 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 SMOXQ9NWM0 555 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 HACD3Q9P035 362 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 FKBPLQ9UIM3 349 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 TRHDEQ9UKU6 1024 aa14.84□□□□□ -0.03
UBXN4-203ENST00000416538 BOD1L1Q8NFC6 3051 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 TCRBV7S2A1N4TA0A589 114 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 OR2AG2A6NM03 316 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 CCL22O00626 93 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 DDX3YO15523 660 aaKnown RBP14.83□□□□□ -0.04
UBXN4-203ENST00000416538 KCNN4O15554 427 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 SGTAO43765 313 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 PRAMEF1O95521 474 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 LIFP15018 202 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 GEMP55040 296 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 XIAPP98170 497 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 MC2RQ01718 297 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 GPR18Q14330 331 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 NFE2L1Q14494 772 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 TMEM164Q5U3C3 297 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 AGAP9Q5VTM2 703 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 WASH2PQ6VEQ5 465 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 TIPARPQ7Z3E1 657 aaKnown RBP14.83□□□□□ -0.04
UBXN4-203ENST00000416538 CDKL3Q8IVW4 592 aaPredicted RBP14.83□□□□□ -0.04
UBXN4-203ENST00000416538 KLHDC8BQ8IXV7 354 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 BEND7Q8N7W2 519 aaPredicted RBP14.83□□□□□ -0.04
UBXN4-203ENST00000416538 GDAP1Q8TB36 358 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 SH3KBP1Q96B97 665 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 SPATA13Q96N96 652 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 SLC12A9Q9BXP2 914 aa14.83□□□□□ -0.04
UBXN4-203ENST00000416538 LUC7LQ9NQ29 371 aaKnown RBP14.83□□□□□ -0.04
UBXN4-203ENST00000416538 WASH6PQ9NQA3 447 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms