RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 FLOT2Q14254 428 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 TGFBIQ15582 683 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 SMU1Q2TAY7 513 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 CARD16Q5EG05 197 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 PDE12Q6L8Q7 609 aaKnown RBP13.42□□□□□ -0.26
LIMS1-205ENST00000410093 C22orf39Q6P5X5 142 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 TPGS1Q6ZTW0 290 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 FRA10AC1Q70Z53 315 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 GALNT13Q8IUC8 556 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 RAVER1Q8IY67 606 aaKnown RBP13.42□□□□□ -0.26
LIMS1-205ENST00000410093 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 SIDT2Q8NBJ9 832 aaKnown RBP13.42□□□□□ -0.26
LIMS1-205ENST00000410093 PDPRQ8NCN5 879 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 HCAR2Q8TDS4 363 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 SH3RF2Q8TEC5 729 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 TRPC4APQ8TEL6 797 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 EEF1AKMT1Q8WVE0 214 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 N4BP2L2Q92802 583 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-205ENST00000410093 EXT2Q93063 718 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 HLA-CQ95604 372 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 ASB9Q96DX5 294 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 NR1H4Q96RI1 486 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-205ENST00000410093 HGH1Q9BTY7 390 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 COL25A1Q9BXS0 654 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-205ENST00000410093 FAM126AQ9BYI3 521 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-205ENST00000410093 TM6SF2Q9BZW4 377 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 YY1AP1Q9H869 796 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 RDH14Q9HBH5 336 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 BPIFA1Q9NP55 256 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 SPAG4Q9NPE6 437 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 ACSS2Q9NR19 701 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 GID8Q9NWU2 228 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 CACNA2D2Q9NY47 1150 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 MARK1Q9P0L2 795 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 CHD7Q9P2D1 2997 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 CRLS1Q9UJA2 301 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 SLC8A2Q9UPR5 921 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 FIS1Q9Y3D6 152 aa13.42□□□□□ -0.26
LIMS1-205ENST00000410093 NPEPPSL1A6NEC2 478 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 CDC7O00311 574 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 IFRD1O00458 451 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 ZNF197O14709 1029 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 KPNA5O15131 536 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 SMAD6O43541 496 aaKnown RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 OR1I1O60431 355 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 ZNF821O75541 412 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 PDE5AO76074 875 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 BAG2O95816 211 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 SPATA31D3P0C874 917 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 PRR35P0CG20 571 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 PRSS56P0CW18 603 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 ENO3P13929 434 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 GPX3P22352 226 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 CD70P32970 193 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 BMPR1AP36894 532 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 CDKN1CP49918 316 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 CLCN2P51788 898 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 CLNS1AP54105 237 aaKnown RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 CDH13P55290 713 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 PSME3P61289 254 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 KLC1Q07866 573 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 RPS6KA2Q15349 733 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 SAMD4BQ5PRF9 694 aaKnown RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 CLEC6AQ6EIG7 209 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 BRAT1Q6PJG6 821 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 PRR23BQ6ZRT6 265 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 SPATA31D4Q6ZUB0 917 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 GPRIN3Q6ZVF9 776 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 NXPE1Q8N323 547 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 GOLM1Q8NBJ4 401 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 NRG4Q8WWG1 115 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 MRPL38Q96DV4 380 aaKnown RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 ASIC4Q96FT7 647 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 LRIG1Q96JA1 1093 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 IL26Q9NPH9 171 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 SDR39U1Q9NRG7 319 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 SPATS2LQ9NUQ6 558 aaKnown RBP13.41□□□□□ -0.26
LIMS1-205ENST00000410093 TDP1Q9NUW8 608 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 ZDHHC3Q9NYG2 299 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 CROTQ9UKG9 612 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 OARD1Q9Y530 152 aa13.41□□□□□ -0.26
LIMS1-205ENST00000410093 K7ERQ8 282 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 PIP5K1BO14986 540 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 SIX3O95343 332 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-205ENST00000410093 OTCP00480 354 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 ENO2P09104 434 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-205ENST00000410093 CYP2A6P11509 494 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-205ENST00000410093 BPIP17213 487 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 CTPS1P17812 591 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 WEE1P30291 646 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 NNMTP40261 264 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 RECQLP46063 649 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-205ENST00000410093 ECT2LQ008S8 904 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 KIF19Q2TAC6 998 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 DGKKQ5KSL6 1271 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 TCHHL1Q5QJ38 904 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-205ENST00000410093 REP15Q6BDI9 236 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 SULT1C3Q6IMI6 304 aa13.4□□□□□ -0.26
LIMS1-205ENST00000410093 FAM151BQ6UXP7 276 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms