RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SLC25A41Q8N5S1 370 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 TC2NQ8N9U0 490 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 IPMKQ8NFU5 416 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 BLOC1S5Q8TDH9 187 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 HAUS1Q96CS2 278 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 MRGPRX2Q96LB1 330 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 C9orf72Q96LT7 481 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 CTRCQ99895 268 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 ADNPQ9H2P0 1102 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 GPN2Q9H9Y4 310 aaPredicted RBP14.5□□□□□ -0.09
CBX3-203ENST00000409747 IL26Q9NPH9 171 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 STARD5Q9NSY2 213 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 ZNF624Q9P2J8 865 aaPredicted RBP14.5□□□□□ -0.09
CBX3-203ENST00000409747 TMEM184BQ9Y519 407 aaPredicted RBP14.5□□□□□ -0.09
CBX3-203ENST00000409747 PCDHA13Q9Y5I0 950 aa14.5□□□□□ -0.09
CBX3-203ENST00000409747 GLYATL1P3A0A0U1RQE8 302 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 APOC4-APOC2K7ER74 178 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 APOC2P02655 101 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 CAPZBP47756 277 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 COPS2P61201 443 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 ADCY2Q08462 1091 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 ABHD18Q0P651 414 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 KHDC1Q4VXA5 237 aaKnown RBP14.49□□□□□ -0.09
CBX3-203ENST00000409747 CCDC181Q5TID7 509 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 ITPRIPL1Q6GPH6 555 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 CYB5D1Q6P9G0 228 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 BBS12Q6ZW61 710 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 DAAM2Q86T65 1068 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 OXNAD1Q96HP4 312 aaPredicted RBP14.49□□□□□ -0.09
CBX3-203ENST00000409747 SLC45A3Q96JT2 553 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 GOLPH3Q9H4A6 298 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 SIDT1Q9NXL6 827 aaKnown RBP14.49□□□□□ -0.09
CBX3-203ENST00000409747 IL17CQ9P0M4 197 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 ANXA9O76027 345 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 STK17BO94768 372 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 IPO7O95373 1038 aaKnown RBP14.49□□□□□ -0.09
CBX3-203ENST00000409747 TYRP1P17643 537 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 RPL10P27635 214 aaKnown RBP14.49□□□□□ -0.09
CBX3-203ENST00000409747 GEMP55040 296 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 GFERP55789 205 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 DMPKQ09013 629 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 MAP7Q14244 749 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 NOMO1Q15155 1222 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 FAM151BQ6UXP7 276 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 C11orf96Q7Z7L8 435 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 AMZ2Q86W34 360 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 ESX1Q8N693 406 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 DDHD1Q8NEL9 900 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 ZDHHC12Q96GR4 267 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 TGM7Q96PF1 710 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 SPRY4Q9C004 299 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 GBA3Q9H227 469 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 ZNF768Q9H5H4 540 aaKnown RBP14.49□□□□□ -0.09
CBX3-203ENST00000409747 SLC40A1Q9NP59 571 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 SMOXQ9NWM0 555 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 GEMIN8Q9NWZ8 242 aaKnown RBP14.49□□□□□ -0.09
CBX3-203ENST00000409747 OGFRQ9NZT2 677 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 TMPRSS11EQ9UL52 423 aa14.49□□□□□ -0.09
CBX3-203ENST00000409747 DNMT3AQ9Y6K1 912 aaPredicted RBP14.49□□□□□ -0.09
CBX3-203ENST00000409747 ASH1LQ9NR48 2969 aaKnown RBP14.48□□□□□ -0.09
CBX3-203ENST00000409747 ZNF106Q9H2Y7 1883 aaKnown RBP14.48□□□□□ -0.09
CBX3-203ENST00000409747 H7C0C1 242 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 ZNF189O75820 626 aaPredicted RBP14.48□□□□□ -0.09
CBX3-203ENST00000409747 RASSF9O75901 435 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 STK10O94804 968 aaKnown RBP14.48□□□□□ -0.09
CBX3-203ENST00000409747 BRAFP15056 766 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 CHRNA4P43681 627 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 ATP5OP48047 213 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 MARCKSL1P49006 195 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 DRG2P55039 364 aaKnown RBP14.48□□□□□ -0.09
CBX3-203ENST00000409747 MC1RQ01726 317 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 FOXM1Q08050 763 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 GPR18Q14330 331 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 CHRNA6Q15825 494 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 KLHL35Q6PF15 583 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 PRSS42Q7Z5A4 293 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 ZNF514Q96K75 400 aaPredicted RBP14.48□□□□□ -0.09
CBX3-203ENST00000409747 PPP1R2P1Q96PQ5 205 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 APMAPQ9HDC9 416 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 EFR3BQ9Y2G0 817 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 SLC30A1Q9Y6M5 507 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 BSNQ9UPA5 3926 aa14.48□□□□□ -0.09
CBX3-203ENST00000409747 KLHL33A6NCF5 533 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 OR52A4PA6NMU1 304 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 F5H423 210 aaPredicted RBP14.47□□□□□ -0.09
CBX3-203ENST00000409747 ZIC2O95409 532 aaPredicted RBP14.47□□□□□ -0.09
CBX3-203ENST00000409747 DLGAP3O95886 979 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 ITGB6P18564 788 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 CETN2P41208 172 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 CCR10P46092 362 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 IL11RAQ14626 422 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 LONRF2Q1L5Z9 754 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 CDKL3Q8IVW4 592 aaPredicted RBP14.47□□□□□ -0.09
CBX3-203ENST00000409747 KRT35Q92764 455 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 LRRC45Q96CN5 670 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 HEMGNQ9BXL5 484 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 ULBP3Q9BZM4 244 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 RAB33BQ9H082 229 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 SLC25A18Q9H1K4 315 aa14.47□□□□□ -0.09
CBX3-203ENST00000409747 EPHA6Q9UF33 1036 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms