RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SQLEQ14534 574 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SULT1C3Q6IMI6 304 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 CENPSQ8N2Z9 138 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 NKAPQ8N5F7 415 aaKnown RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 DOK4Q8TEW6 326 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TBL1XR1Q9BZK7 514 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 RIOX1Q9H6W3 641 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 GLTPD2A6NH11 291 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 MECP2P51608 486 aaKnown RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ALDH3A2P51648 485 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TLE2Q04725 743 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 CBX3Q13185 183 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SIDT2Q8NBJ9 832 aaKnown RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SPATA22Q8NHS9 363 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 NAT14Q8WUY8 206 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 DUSP16Q9BY84 665 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TTTY10Q9BZA0 68 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 A0A0A0MRY4 1105 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TCRBV21S2A2A0A5A6 115 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 LGR5O75473 907 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 FADS2O95864 444 aaKnown RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 CSKP41240 450 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ID2Q02363 134 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 NPAS4Q8IUM7 802 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ANKRD52Q8NB46 1076 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SPATA13Q96N96 652 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 MCCC1Q96RQ3 725 aaPredicted RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 IRF2BPLQ9H1B7 796 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 WNT6Q9Y6F9 365 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 EME2A4GXA9 379 aaPredicted RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 PLIN3O60664 434 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TGFB1P01137 390 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 GLI1P08151 1106 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 HOXB2P14652 356 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 RGS8P57771 180 aaPredicted RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SLC25A3Q00325 362 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ZMYND11Q15326 602 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 MEA1Q16626 185 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 EEF1DP3Q658K8 133 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 CLEC6AQ6EIG7 209 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 KCNK18Q7Z418 384 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 AMIGO2Q86SJ2 522 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 GPR180Q86V85 440 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 DHRSXQ8N5I4 330 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF75CPQ92670 426 aaPredicted RBP8.34□□□□□ -1.07
SCN9A-203ENST00000409672 APBB2Q92870 758 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 TESCQ96BS2 214 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 MFSD14AQ96MC6 490 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 VNN3Q9NY84 501 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 SYNPO2Q9UMS6 1093 aa8.34□□□□□ -1.07
SCN9A-203ENST00000409672 ABCA6Q8N139 1617 aa8.34□□□□□ -1.08
SCN9A-203ENST00000409672 TMEM265A0A087WTH1 108 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 OTCP00480 354 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 RPS6KA3P51812 740 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CASP6P55212 293 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 MAMLD1Q13495 774 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ATP13A5Q4VNC0 1218 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 GPR65Q8IYL9 337 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CCDC120Q96HB5 630 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 OXNAD1Q96HP4 312 aaPredicted RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF285Q96NJ3 590 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ERGIC2Q96RQ1 377 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PNPLA8Q9NP80 782 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 YARS2Q9Y2Z4 477 aaKnown RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SLC38A8A6NNN8 435 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 HSF2Q03933 536 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 UBQLNLQ8IYU4 475 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 GDAP2Q9NXN4 497 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 RWDD3Q9Y3V2 267 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 A0A1W2PRG6 482 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SIGLEC16A6NMB1 481 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 E2F3O00716 465 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SLC16A5O15375 505 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 LAMTOR5O43504 91 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PRNPP04156 253 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 HEXBP07686 556 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SNRPB2P08579 225 aaKnown RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PAEPP09466 180 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 OTX2P32243 289 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PPP3R1P63098 170 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SEMA3AQ14563 771 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 TEAD2Q15562 447 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 TMCO2Q7Z6W1 182 aaPredicted RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 CLP1Q92989 425 aaKnown RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SIPA1Q96FS4 1042 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PPM1MQ96MI6 270 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 C11orf84Q9BUA3 381 aaPredicted RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 SLC39A8Q9C0K1 460 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ARHGAP20Q9P2F6 1191 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PDE4DIPQ5VU43 2346 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 PNPLA6Q8IY17 1366 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 UBE2QL1A1L167 161 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 EIF2S3P41091 472 aaKnown RBP8.33□□□□□ -1.08
SCN9A-203ENST00000409672 OAZ1P54368 228 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 TATDN1Q6P1N9 297 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 ZCCHC12Q6PEW1 402 aa8.33□□□□□ -1.08
SCN9A-203ENST00000409672 MON1AQ86VX9 555 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms