RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 TSGA13Q96PP4 275 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 TCF12Q99081 682 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 PNPLA3Q9NST1 481 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 BRCA1P38398 1863 aaKnown RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 A0A1W2PQ45 241 aaPredicted RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 A0A1W2PQY0 241 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 PTGES3LE9PB15 166 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CCL16O15467 120 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 SMAD6O43541 496 aaKnown RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CPSF4O95639 269 aaKnown RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 STATHP02808 62 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 SERPIND1P05546 499 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 RHOQP17081 205 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 ADRA1AP35348 466 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 IST1P53990 364 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 RFTN1Q14699 578 aaPredicted RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 GPR107Q5VW38 600 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CNTN4Q8IWV2 1026 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 FOXJ1Q92949 421 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 KCTD14Q9BQ13 255 aaPredicted RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 MCMBPQ9BTE3 642 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 TRIM15Q9C019 465 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 VPS45Q9NRW7 570 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 EI24O14681 340 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 COCHO43405 550 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CDK14O94921 469 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CYP4B1P13584 511 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 HNF4AP41235 474 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 HTR6P50406 440 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 LSM3P62310 102 aaKnown RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 FUNDC1Q8IVP5 155 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 BEND7Q8N7W2 519 aaPredicted RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 SEPT8Q92599 483 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 ING2Q9H160 280 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 NSUN3Q9H649 340 aaKnown RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 CLK4Q9HAZ1 481 aaKnown RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 SEPT3Q9UH03 358 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 ASB1Q9Y576 335 aa13.25□□□□□ -0.29
COL6A2-204ENST00000409416 MAGED1Q9Y5V3 778 aaPredicted RBP13.25□□□□□ -0.29
COL6A2-204ENST00000409416 SEC22BO75396 215 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 ECI2O75521 394 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 DIRAS1O95057 198 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 S1PR4O95977 384 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 GBAP04062 536 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 CSKP41240 450 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 DNAJB13P59910 316 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 FAM189BP81408 668 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 MYBPC3Q14896 1274 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 ATP6AP1LQ52LC2 224 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 SLC2A7Q6PXP3 512 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 CHERPQ8IWX8 916 aaKnown RBP13.24□□□□□ -0.29
COL6A2-204ENST00000409416 FAM126BQ8IXS8 530 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 SLC22A17Q8WUG5 538 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 ACTR8Q9H981 624 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL6A2-204ENST00000409416 SMOXQ9NWM0 555 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 TMX2-CTNND1H3BSU7 103 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 ACSL4O60488 711 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 ZNF682O95780 498 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 CAPN1P07384 714 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 FAM163BP0C2L3 166 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 LBPP18428 481 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 HERVK_113P63132 956 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 HPCAP84074 193 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 CLCQ05315 142 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 NADSYN1Q6IA69 706 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 GCNT7Q6ZNI0 430 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 LIMS2Q7Z4I7 341 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 GPR156Q8NFN8 814 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 THAP11Q96EK4 314 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 MAELQ96JY0 434 aaKnown RBP13.24□□□□□ -0.29
COL6A2-204ENST00000409416 ERVK-6Q9BXR3 956 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 EBPLQ9BY08 206 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 GID8Q9NWU2 228 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 CFAP97Q9P2B7 532 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 PCDHB8Q9UN66 801 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 PLXNA1Q9UIW2 1896 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 DNAH14Q0VDD8 3507 aa13.24□□□□□ -0.29
COL6A2-204ENST00000409416 DYTNA2CJ06 578 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 SLC25A14O95258 325 aaPredicted RBP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 KLKB1P03952 638 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 WASP42768 502 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 ABRQ12979 859 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 DCTN2Q13561 401 aaKnown RBP13.23□□□□□ -0.29
COL6A2-204ENST00000409416 DEFB115Q30KQ5 88 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 KDELC1Q6UW63 502 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 KIAA0408Q6ZU52 694 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 STK32CQ86UX6 486 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 TICAM1Q8IUC6 712 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 FIBCD1Q8N539 461 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 IRGQQ8WZA9 623 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 AASSQ9UDR5 926 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 CDC14AQ9UNH5 594 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 TLR6Q9Y2C9 796 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 CEPT1Q9Y6K0 416 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 A0A0G2JMZ2 1700 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 LRRC37A2A6NM11 1700 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 FFAR2O15552 330 aa13.23□□□□□ -0.29
COL6A2-204ENST00000409416 PRAMEF1O95521 474 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms