RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 PDXKO00764 312 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 DNALI1O14645 258 aaPredicted RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 TBX3O15119 743 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 KPNA5O15131 536 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 SLC43A1O75387 559 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 FAM155BO75949 473 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 POMCP01189 267 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 INHBBP09529 407 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 DLATP10515 647 aaKnown RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 KRT3P12035 628 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 GZMAP12544 262 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 ACTN1P12814 892 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 PRKACBP22694 351 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 RPA1P27694 616 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 DCKP27707 260 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 GCAP28676 217 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 CCND3P30281 292 aaPredicted RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 NMT1P30419 496 aaKnown RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 HOXD13P35453 343 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 TECP42680 631 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 CPA2P48052 419 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 CASP5P51878 434 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 NLRP11P59045 1033 aaKnown RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 GNG2P59768 71 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 BASP1P80723 227 aaKnown RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 FPGSQ05932 587 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 HSPA14Q0VDF9 509 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 CETN1Q12798 172 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 PTP4A2Q12974 167 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 PDIA2Q13087 525 aaKnown RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 PSMD6Q15008 389 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 CALCRLQ16602 461 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 NFIL3Q16649 462 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 SUPT20HL1Q3ZLR7 823 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 C10orf62Q5T681 223 aaPredicted RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 KAZNQ674X7 775 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 ITPRIPL1Q6GPH6 555 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 DPY19L2P1Q6NXN4 242 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 DPP9Q86TI2 863 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 SETD3Q86TU7 594 aaPredicted RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 FAM83AQ86UY5 434 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 PALB2Q86YC2 1186 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 TICAM1Q8IUC6 712 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 CHERPQ8IWX8 916 aaKnown RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 SIX6OS1Q8N1H7 587 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 SLC25A41Q8N5S1 370 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 TOR1AIP2Q8NFQ8 470 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 GRPEL2Q8TAA5 225 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 ZNF564Q8TBZ8 553 aaPredicted RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 TCP10LQ8TDR4 215 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 KBTBD7Q8WVZ9 684 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 KRT35Q92764 455 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 C12orf43Q96C57 262 aaKnown RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 CFAP36Q96G28 342 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 RILPQ96NA2 401 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 GNRHR2Q96P88 292 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 OR14A2Q96R54 314 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 AGPAT1Q99943 283 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 YTHDF1Q9BYJ9 559 aaKnown RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 ZNF341Q9BYN7 854 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 TRIM54Q9BYV2 358 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 FRMD8Q9BZ67 464 aaPredicted RBP5.45□□□□□ -1.54
CLK1-202ENST00000409403 OR2B2Q9GZK3 357 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 SMYD3Q9H7B4 428 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 BRD9Q9H8M2 597 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 SLC28A3Q9HAS3 691 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 SIX2Q9NPC8 291 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 BARHL2Q9NY43 387 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 PLA2G3Q9NZ20 509 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 JKAMPQ9P055 326 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 ARMCX1Q9P291 453 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 STK39Q9UEW8 545 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 VPS28Q9UK41 221 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 POMPQ9Y244 141 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 ADAMTS20P59510 1910 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 IGSF9BQ9UPX0 1349 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 ZZEF1O43149 2961 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 FRYQ5TBA9 3013 aa5.45□□□□□ -1.54
CLK1-202ENST00000409403 MYH11P35749 1972 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 hCG_1642624A0A1W2PR95 340 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 ESYT2A0FGR8 921 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 LRRIQ4A6NIV6 560 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 PRR5-ARHGAP8B1AHC4 643 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 KLRF2D3W0D1 207 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 M0R296 226 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 TP73O15350 636 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 CYP1A2P05177 515 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 MYOGP15173 224 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 HDCP19113 662 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 RRM1P23921 792 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 SERPINB1P30740 379 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 SLC6A4P31645 630 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 CNR2P34972 360 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 GNL1P36915 607 aaPredicted RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 GPD2P43304 727 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 KCNJ1P48048 391 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 KCNJ5P48544 419 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 TMBIM6P55061 237 aa5.44□□□□□ -1.54
CLK1-202ENST00000409403 SUMO3P55854 103 aaPredicted RBP5.44□□□□□ -1.54
CLK1-202ENST00000409403 NOMO3P69849 1222 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms