RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ZSCAN5AQ9BUG6 496 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 OSGEPL1Q9H4B0 414 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 CBX8Q9HC52 389 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 MAGEE1Q9HCI5 957 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 SIDT1Q9NXL6 827 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 OGFRQ9NZT2 677 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 ZNF624Q9P2J8 865 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 SLC23A2Q9UGH3 650 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 ANAPC2Q9UJX6 822 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 SHOC2Q9UQ13 582 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 HEY1Q9Y5J3 304 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 SLC30A1Q9Y6M5 507 aa9.03□□□□□ -0.96
NIF3L1-203ENST00000409129 PRRC2CQ9Y520 2896 aaKnown RBP9.02□□□□□ -0.96
NIF3L1-203ENST00000409129 ZNF487B1APH4 448 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 TOX3O15405 576 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 VEGFDO43915 354 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 SEMA7AO75326 666 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 MTA2O94776 668 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 GYPCP04921 128 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 PIRTP0C851 137 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 TYRP1P17643 537 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 AMD1P17707 334 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 NR1D1P20393 614 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 OAS2P29728 719 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 DCTP40126 519 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 SLC19A1P41440 591 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 CDK18Q07002 472 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 AP1B1Q10567 949 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 INSCQ1MX18 579 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 FAM182AQ5T1J6 154 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 C16orf46Q6P387 395 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 CRTC3Q6UUV7 619 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 ABRAXAS1Q6UWZ7 409 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 C6orf15Q6UXA7 325 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 NT5DC3Q86UY8 548 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 LRRTM4Q86VH4 590 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 TRIM48Q8IWZ4 208 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 PLD5Q8N7P1 536 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 CTNNBL1Q8WYA6 563 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 GLYATL1Q969I3 302 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 TADA1Q96BN2 335 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 IMP4Q96G21 291 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 TGM7Q96PF1 710 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 TIMM29Q9BSF4 260 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 MAK16Q9BXY0 300 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 PACSIN1Q9BY11 444 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 CEP41Q9BYV8 373 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 GPR63Q9BZJ6 419 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 ULBP3Q9BZM4 244 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 SLC25A51Q9H1U9 297 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 NFKBIL1Q9UBC1 381 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 DNAJC16Q9Y2G8 782 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 ZNF711Q9Y462 761 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 RPS6KL1Q9Y6S9 549 aa9.02□□□□□ -0.97
NIF3L1-203ENST00000409129 CSMD2Q7Z408 3487 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 LRRD1A4D1F6 860 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 PRR19A6NJB7 356 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 C3orf70A6NLC5 250 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 PDZK1P1A8MUH7 402 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 CDK14O94921 469 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SLC4A1P02730 911 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 BRAFP15056 766 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 ZFXP17010 805 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 ZNF28P17035 718 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 BPIP17213 487 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 IDSP22304 550 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 GNLYP22749 145 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 F8A1P23610 371 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 HNRNPH3P31942 346 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 CASP14P31944 242 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 LEPRP48357 1165 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SEPHS1P49903 392 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SH3BP2P78314 561 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SEPT6Q14141 434 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 IL11RAQ14626 422 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 MESDQ14696 234 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 PDK1Q15118 436 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SLC14A2Q15849 920 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SEPT7Q16181 437 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 PCSK7Q16549 785 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SLC18A3Q16572 532 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 PLA2G4EQ3MJ16 856 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 ATP1A1-AS1Q5TC04 95 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 AGAP9Q5VTM2 703 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SLC9A4Q6AI14 798 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 CCDC70Q6NSX1 233 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 WASH2PQ6VEQ5 465 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 VSIG1Q86XK7 387 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 ZNF547Q8IVP9 402 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 RBM12BQ8IXT5 1001 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 AGAP3Q96P47 875 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 OR6C1Q96RD1 312 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SRPK1Q96SB4 655 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 XPO4Q9C0E2 1151 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 BRD8Q9H0E9 1235 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 SLC40A1Q9NP59 571 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 WASH6PQ9NQA3 447 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 POT1Q9NUX5 634 aa9.01□□□□□ -0.97
NIF3L1-203ENST00000409129 KCTD3Q9Y597 815 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms