RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 GRB7Q14451 532 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 PAN2Q504Q3 1202 aaKnown RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 NBPF12Q5TAG4 269 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 UBE2UQ5VVX9 321 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 PPP2R2DQ66LE6 453 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TXNDC11Q6PKC3 985 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ZNF517Q6ZMY9 492 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TUBA1AQ71U36 451 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ZNF534Q76KX8 674 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 RRM2BQ7LG56 351 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 RIOX2Q8IUF8 465 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 AGBL3Q8NEM8 1001 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 OR13J1Q8NGT2 312 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CLHC1Q8NHS4 586 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 SLC35F5Q8WV83 523 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 FCGR1BQ92637 280 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 C18orf25Q96B23 403 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 PHOX2BQ99453 314 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 KCNS3Q9BQ31 491 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 MROQ9BYG7 248 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 VRTNQ9H8Y1 702 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TMCC3Q9ULS5 477 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 SPATA2Q9UM82 520 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 SAMD4AQ9UPU9 718 aaKnown RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 PCDHGA10Q9Y5H3 936 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 FAM240BA0A1B0GVZ2 78 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 PRR23AA6NEV1 266 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 FGF10O15520 208 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 NUAK1O60285 661 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 RAMP2O60895 175 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 OR4F21O95013 312 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 NTRK1P04629 796 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 IFI30P13284 250 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 HOXB6P17509 224 aaKnown RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 RRM2P31350 389 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CYP2C18P33260 490 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 LHX1P48742 406 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 DGKQP52824 942 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ERVK-8P63133 956 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TSTD2Q5T7W7 516 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CEP97Q8IW35 865 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 SPARTQ8N0X7 666 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 UBE2J2Q8N2K1 259 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CNIH3Q8TBE1 160 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ATL1Q8WXF7 558 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 POP5Q969H6 163 aaKnown RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ASIC4Q96FT7 647 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 KCNA7Q96RP8 456 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CINPQ9BW66 212 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 DSN1Q9H410 356 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 NANOGQ9H9S0 305 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CCDC177Q9NQR7 707 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 NECTIN3Q9NQS3 549 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 GMPR2Q9P2T1 348 aaKnown RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 OPTCQ9UBM4 332 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 OGDHLQ9ULD0 1010 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ZCWPW2A0A1B0GU75 182 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TCRBV5S1A1TA0A578 114 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 PIPSLA2A3N6 862 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ZSCAN5BA6NJL1 495 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CENPBD1B2RD01 187 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TMX2-CTNND1H3BSU7 103 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 SLC1A7O00341 560 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 WNT10BO00744 389 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ZNF197O14709 1029 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 MYL12BO14950 172 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 DYNC1LI2O43237 492 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CPNE3O75131 537 aaKnown RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 B3GAT3O94766 335 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ENDOD1O94919 500 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 FYNP06241 537 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 SLC6A2P23975 617 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 PIK3CGP48736 1102 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 NDUFV1P49821 464 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CD47Q08722 323 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TP53BP2Q13625 1128 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 SPCS2Q15005 226 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 SAMD7Q7Z3H4 446 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ELMOD2Q8IZ81 293 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 OR13F1Q8NGS4 319 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 LRRC20Q8TCA0 184 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 COPS5Q92905 334 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 MTFMTQ96DP5 389 aaKnown RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 KLHL5Q96PQ7 755 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TMEM209Q96SK2 561 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 NEURL2Q9BR09 285 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 KIFC1Q9BW19 673 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TEX12Q9BXU0 123 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 TRIM45Q9H8W5 580 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 GPN2Q9H9Y4 310 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ANKHQ9HCJ1 492 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 FAM118AQ9NWS6 357 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 ERVK-18Q9QC07 812 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 CDH7Q9ULB5 785 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 PTGDR2Q9Y5Y4 395 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 SESN1Q9Y6P5 492 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 NPEPPSL1A6NEC2 478 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 H3BRB1 525 aa7.32□□□□□ -1.24
HDAC9-202ENST00000405010 hCG_2039718K7EN88 272 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms