RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 LIPMQ5VYY2 423 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 NEK5Q6P3R8 708 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 NAPRTQ6XQN6 538 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 HSD11B1LQ7Z5J1 315 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 OR2T34Q8NGX1 318 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 KCTD4Q8WVF5 259 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 SREK1Q8WXA9 508 aaKnown RBP14.76□□□□□ -0.05
CAPN3-207ENST00000397200 RLN3Q8WXF3 142 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 TOE1Q96GM8 510 aaKnown RBP14.76□□□□□ -0.05
CAPN3-207ENST00000397200 TSNARE1Q96NA8 513 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 C19orf43Q9BQ61 176 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D10AQ9BXI6 508 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 COL25A1Q9BXS0 654 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-207ENST00000397200 CORO1CQ9ULV4 474 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-207ENST00000397200 PLXND1Q9Y4D7 1925 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 ZDBF2Q9HCK1 2354 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 GOLGA8CPA6NN73 597 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 RNGTTO60942 597 aaKnown RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 RPP40O75818 363 aaKnown RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 TM7SF2O76062 418 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 ETV3P41162 512 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 SPINT3P49223 89 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 ARSDP51689 593 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 KPNA2P52292 529 aaKnown RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 HK2P52789 917 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 PRAMEP78395 509 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 DLG1Q12959 904 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 ZDHHC20Q5W0Z9 365 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 CNSTQ6PJW8 725 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 TSSK4Q6SA08 328 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 RAVER1Q8IY67 606 aaKnown RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 CBARPQ8N350 705 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 FSTL5Q8N475 847 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 SCG3Q8WXD2 468 aaKnown RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 ELMO2Q96JJ3 720 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 SPACA7Q96KW9 195 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 COQ10AQ96MF6 247 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 EBF4Q9BQW3 602 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 CCDC106Q9BWC9 280 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 GATA5Q9BWX5 397 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 DRC3Q9H069 523 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 RAD18Q9NS91 495 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 WSB2Q9NYS7 404 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 FNDC3AQ9Y2H6 1198 aaKnown RBP14.75□□□□□ -0.05
CAPN3-207ENST00000397200 COQ6Q9Y2Z9 468 aa14.75□□□□□ -0.05
CAPN3-207ENST00000397200 EML5Q05BV3 1969 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 IGHV1OR15-9A0A0B4J2B8 117 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 CCDC163A0A0D9SF12 145 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 A0A1W2PQU0 124 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 RGSL1A5PLK6 1076 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 IGLON5A6NGN9 336 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 CCL22O00626 93 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 WNT9AO14904 365 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 S1PR4O95977 384 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 KITP10721 976 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 BPIP17213 487 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 OGNP20774 298 aaKnown RBP14.74□□□□□ -0.05
CAPN3-207ENST00000397200 AVPR2P30518 371 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 SPAM1P38567 509 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 CSTF1Q05048 431 aaKnown RBP14.74□□□□□ -0.05
CAPN3-207ENST00000397200 MAP7D1Q3KQU3 841 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 USP39Q53GS9 565 aaKnown RBP14.74□□□□□ -0.05
CAPN3-207ENST00000397200 ZNF789Q5FWF6 425 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 RBM20Q5T481 1227 aaKnown RBP14.74□□□□□ -0.05
CAPN3-207ENST00000397200 SEL1L3Q68CR1 1132 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 Q6ZVL8 140 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 HORMAD1Q86X24 394 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 TREML1Q86YW5 311 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 HDAC10Q969S8 669 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 TSPAN17Q96FV3 270 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 CDKN2AIPNLQ96HQ2 116 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 TBATAQ96M53 351 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 OLFM1Q99784 485 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 MIPEPQ99797 713 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 MRPL46Q9H2W6 279 aaKnown RBP14.74□□□□□ -0.05
CAPN3-207ENST00000397200 PNPOQ9NVS9 261 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 XPR1Q9UBH6 696 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 CD84Q9UIB8 345 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 FKBPLQ9UIM3 349 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 RUVBL2Q9Y230 463 aaKnown RBP14.74□□□□□ -0.05
CAPN3-207ENST00000397200 PLXNA2O75051 1894 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 FAM86C2PA6NEL3 165 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 RECQL5O94762 991 aaPredicted RBP14.74□□□□□ -0.05
CAPN3-207ENST00000397200 TDGF1P13385 188 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 GM2AP17900 193 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 SLC26A3P40879 764 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 PTPN5P54829 565 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 PPP2CBP62714 309 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 PPP2CAP67775 309 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 DMWDQ09019 674 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 SGCGQ13326 291 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 ZNF460Q14592 562 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 TMEM259Q4ZIN3 620 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 TECRLQ5HYJ1 363 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 RFLNAQ6ZTI6 216 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 CYP2U1Q7Z449 544 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 TECPR1Q7Z6L1 1165 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 TRIM69Q86WT6 500 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 NRSN1Q8IZ57 195 aa14.74□□□□□ -0.05
CAPN3-207ENST00000397200 FAM160A2Q8N612 972 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms