RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 CCDC160A6NGH7 325 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 SRPRAP08240 638 aaKnown RBP11.77□□□□□ -0.52
ATN1-202ENST00000396684 THOP1P52888 689 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 LSM12Q3MHD2 195 aaKnown RBP11.77□□□□□ -0.52
ATN1-202ENST00000396684 FUT11Q495W5 492 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 AASDHQ4L235 1098 aaPredicted RBP11.77□□□□□ -0.52
ATN1-202ENST00000396684 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.77□□□□□ -0.52
ATN1-202ENST00000396684 NAPRTQ6XQN6 538 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 MTSS1LQ765P7 747 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 CNTN4Q8IWV2 1026 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 PNPLA1Q8N8W4 532 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 ITFG1Q8TB96 612 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 CLP1Q92989 425 aaKnown RBP11.77□□□□□ -0.52
ATN1-202ENST00000396684 PPP3R2Q96LZ3 170 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 CDRT15Q96T59 188 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 ECSITQ9BQ95 431 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 NOL11Q9H8H0 719 aaKnown RBP11.77□□□□□ -0.52
ATN1-202ENST00000396684 PHPT1Q9NRX4 125 aaPredicted RBP11.77□□□□□ -0.52
ATN1-202ENST00000396684 IL17CQ9P0M4 197 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 SPASTQ9UBP0 616 aa11.77□□□□□ -0.52
ATN1-202ENST00000396684 RALGAPA2Q2PPJ7 1873 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 C16orf96A6NNT2 1141 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 PRAMEF12O95522 483 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 CDKN2DP55273 166 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 PKNOX1P55347 436 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 HTRA4P83105 476 aaPredicted RBP11.77□□□□□ -0.53
ATN1-202ENST00000396684 TECRLQ5HYJ1 363 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 SULT1C3Q6IMI6 304 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 TMEM220Q6QAJ8 160 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 FAM124AQ86V42 546 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 TXNDC5Q8NBS9 432 aaKnown RBP11.77□□□□□ -0.53
ATN1-202ENST00000396684 JADE3Q92613 823 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 FGF13Q92913 245 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 MTFMTQ96DP5 389 aaKnown RBP11.77□□□□□ -0.53
ATN1-202ENST00000396684 MYEOVQ96EZ4 313 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 SCRN2Q96FV2 425 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 THUMPD3Q9BV44 507 aaKnown RBP11.77□□□□□ -0.53
ATN1-202ENST00000396684 NSUN3Q9H649 340 aaKnown RBP11.77□□□□□ -0.53
ATN1-202ENST00000396684 GDE1Q9NZC3 331 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 ASF1AQ9Y294 204 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 SHROOM3Q8TF72 1996 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 GNG14A0A1W2PPG7 69 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 CCDC154A6NI56 674 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 FFAR2O15552 330 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 MAPK9P45984 424 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 RAP1GDS1P52306 607 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 TCHHL1Q5QJ38 904 aaPredicted RBP11.77□□□□□ -0.53
ATN1-202ENST00000396684 RNF148Q8N7C7 305 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 CHST14Q8NCH0 376 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 NUS1Q96E22 293 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 WDR41Q9HAD4 459 aa11.77□□□□□ -0.53
ATN1-202ENST00000396684 C8GP07360 202 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 SLC35G4P0C7Q5 338 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 CALRP27797 417 aaKnown RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 TIE1P35590 1138 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 ARCN1P48444 511 aaKnown RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 SHHQ15465 462 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 TRIP10Q15642 601 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 GPRC6AQ5T6X5 926 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 VITQ6UXI7 678 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 MDGA1Q8NFP4 955 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 ISG20Q96AZ6 181 aaKnown RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 RCN3Q96D15 328 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 PCDH12Q9NPG4 1184 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 IRAK3Q9Y616 596 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 KCNE2Q9Y6J6 123 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 GOLGA4Q13439 2230 aaKnown RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 MGAT4DA6NG13 374 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 EVPLLA8MZ36 301 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 PRSS56P0CW18 603 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 PSMC3P17980 439 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 FDXRP22570 491 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 MAGEA10P43363 369 aaPredicted RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 RUNX3Q13761 415 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 ELAVL3Q14576 367 aaKnown RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 ZNF513Q8N8E2 541 aaPredicted RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 GPR150Q8NGU9 434 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 REPS1Q96D71 796 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 RMND5AQ9H871 391 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 TMEM247A6NEH6 219 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 ATP1B2P14415 290 aaPredicted RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 IDO1P14902 403 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 ME2P23368 584 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 GRK3P35626 688 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 ZNF140P52738 457 aaPredicted RBP11.76□□□□□ -0.53
ATN1-202ENST00000396684 GTF2H2Q13888 395 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 LRRC36Q1X8D7 754 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 SLC9B1Q4ZJI4 515 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 GTF2H2CQ6P1K8 395 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 TSPAN33Q86UF1 283 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 CFAP206Q8IYR0 622 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 HDDC3Q8N4P3 179 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 WFDC5Q8TCV5 224 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 C1orf50Q9BV19 199 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 FBXL21Q9UKT6 434 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 CDH7Q9ULB5 785 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 SLC12A4Q9UP95 1085 aa11.76□□□□□ -0.53
ATN1-202ENST00000396684 CACNB4O00305 520 aaPredicted RBP11.75□□□□□ -0.53
ATN1-202ENST00000396684 FKBP6O75344 327 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms