RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PCDHGA3Q9Y5H0 932 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 ARL5AQ9Y689 179 aa18.01■□□□□ 0.47
FXN-203ENST00000396366 ZNF462Q96JM2 2506 aa18■□□□□ 0.47
FXN-203ENST00000396366 GLYATL1P3A0A0U1RQE8 302 aa18■□□□□ 0.47
FXN-203ENST00000396366 OR52A4PA6NMU1 304 aa18■□□□□ 0.47
FXN-203ENST00000396366 BTNL10A8MVZ5 291 aa18■□□□□ 0.47
FXN-203ENST00000396366 B4E171 279 aa18■□□□□ 0.47
FXN-203ENST00000396366 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18■□□□□ 0.47
FXN-203ENST00000396366 KCNN4O15554 427 aa18■□□□□ 0.47
FXN-203ENST00000396366 RBP3P10745 1247 aa18■□□□□ 0.47
FXN-203ENST00000396366 CD82P27701 267 aa18■□□□□ 0.47
FXN-203ENST00000396366 PSMB4P28070 264 aa18■□□□□ 0.47
FXN-203ENST00000396366 ADRA1AP35348 466 aa18■□□□□ 0.47
FXN-203ENST00000396366 TSPAN7P41732 249 aa18■□□□□ 0.47
FXN-203ENST00000396366 VAV2P52735 878 aa18■□□□□ 0.47
FXN-203ENST00000396366 CTSCP53634 463 aa18■□□□□ 0.47
FXN-203ENST00000396366 EPHA4P54764 986 aa18■□□□□ 0.47
FXN-203ENST00000396366 GEMP55040 296 aa18■□□□□ 0.47
FXN-203ENST00000396366 GFERP55789 205 aa18■□□□□ 0.47
FXN-203ENST00000396366 RWDD2BP57060 319 aa18■□□□□ 0.47
FXN-203ENST00000396366 CLCA4Q14CN2 919 aa18■□□□□ 0.47
FXN-203ENST00000396366 DARS2Q6PI48 645 aaKnown RBP18■□□□□ 0.47
FXN-203ENST00000396366 RANBP10Q6VN20 620 aa18■□□□□ 0.47
FXN-203ENST00000396366 TMEM26Q6ZUK4 368 aa18■□□□□ 0.47
FXN-203ENST00000396366 TMEM139Q8IV31 216 aa18■□□□□ 0.47
FXN-203ENST00000396366 CCDC110Q8TBZ0 833 aa18■□□□□ 0.47
FXN-203ENST00000396366 SGF29Q96ES7 293 aa18■□□□□ 0.47
FXN-203ENST00000396366 WBP1Q96G27 269 aa18■□□□□ 0.47
FXN-203ENST00000396366 PACSIN2Q9UNF0 486 aaPredicted RBP18■□□□□ 0.47
FXN-203ENST00000396366 EFR3BQ9Y2G0 817 aa18■□□□□ 0.47
FXN-203ENST00000396366 CCDC66A2RUB6 948 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 STMND1H3BQB6 276 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 POP7O75817 140 aaKnown RBP17.99■□□□□ 0.47
FXN-203ENST00000396366 IPO7O95373 1038 aaKnown RBP17.99■□□□□ 0.47
FXN-203ENST00000396366 VIPP01282 170 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 IDSP22304 550 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 PTPN7P35236 360 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 GTF2H3Q13889 308 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 SPARCL1Q14515 664 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 LINC00303Q3SY05 128 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 GPRC6AQ5T6X5 926 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 ABRAXAS1Q6UWZ7 409 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 FAM83HQ6ZRV2 1179 aaPredicted RBP17.99■□□□□ 0.47
FXN-203ENST00000396366 MICALCLQ6ZW33 695 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 CDKL3Q8IVW4 592 aaPredicted RBP17.99■□□□□ 0.47
FXN-203ENST00000396366 TRIM48Q8IWZ4 208 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 DTX3LQ8TDB6 740 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 RNF31Q96EP0 1072 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 TTC25Q96NG3 672 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 BAG1Q99933 345 aaPredicted RBP17.99■□□□□ 0.47
FXN-203ENST00000396366 DESI2Q9BSY9 194 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 DDA1Q9BW61 102 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 APMAPQ9HDC9 416 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 PKP3Q9Y446 797 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 PCDHGA4Q9Y5G9 962 aa17.99■□□□□ 0.47
FXN-203ENST00000396366 LILRA5A6NI73 299 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 OR2AG2A6NM03 316 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 STX7O15400 261 aaKnown RBP17.98■□□□□ 0.47
FXN-203ENST00000396366 ANXA9O76027 345 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 MC2RQ01718 297 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 MSLNQ13421 630 aaPredicted RBP17.98■□□□□ 0.47
FXN-203ENST00000396366 DCAF12Q5T6F0 453 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 ITPRIPL1Q6GPH6 555 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 TMEM220Q6QAJ8 160 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 KIAA1328Q86T90 577 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 BEND7Q8N7W2 519 aaPredicted RBP17.98■□□□□ 0.47
FXN-203ENST00000396366 EXD3Q8N9H8 876 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 CCDC112Q8NEF3 446 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 DDHD1Q8NEL9 900 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 OR4K2Q8NGD2 314 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 ZNF398Q8TD17 642 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 BRSK1Q8TDC3 778 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 EXTL1Q92935 676 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 CALR3Q96L12 384 aaKnown RBP17.98■□□□□ 0.47
FXN-203ENST00000396366 ASPSCR1Q9BZE9 553 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 UCK1Q9HA47 277 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 SLC40A1Q9NP59 571 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 PSMD13Q9UNM6 376 aa17.98■□□□□ 0.47
FXN-203ENST00000396366 UBXN7O94888 489 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 LEPRP48357 1165 aaKnown RBP17.97■□□□□ 0.47
FXN-203ENST00000396366 GPR18Q14330 331 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 LDLRAP1Q5SW96 308 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 AGAP9Q5VTM2 703 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 ZDHHC20Q5W0Z9 365 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 DENND5AQ6IQ26 1287 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 WASH2PQ6VEQ5 465 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 DET1Q7L5Y6 550 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 AMZ2Q86W34 360 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 RSC1A1Q92681 617 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 RTP4Q96DX8 246 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 TGM7Q96PF1 710 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 SPRY4Q9C004 299 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 WASH6PQ9NQA3 447 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 FKBPLQ9UIM3 349 aa17.97■□□□□ 0.47
FXN-203ENST00000396366 BOD1L1Q8NFC6 3051 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 CAPN5O15484 640 aaPredicted RBP17.96■□□□□ 0.47
FXN-203ENST00000396366 DDX3YO15523 660 aaKnown RBP17.96■□□□□ 0.47
FXN-203ENST00000396366 KIF1CO43896 1103 aaKnown RBP17.96■□□□□ 0.47
FXN-203ENST00000396366 TJP3O95049 919 aa17.96■□□□□ 0.47
FXN-203ENST00000396366 PRAMEF1O95521 474 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms