RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 GCKP35557 465 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 SPAM1P38567 509 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 DIO3P55073 304 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 HERC3Q15034 1050 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 MMEL1Q495T6 779 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 ATP13A5Q4VNC0 1218 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 PIGGQ5H8A4 983 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 FAM109BQ6ICB4 259 aaPredicted RBP14.89□□□□□ -0.03
GPC3-202ENST00000394299 CERS6Q6ZMG9 384 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 ZNF483Q8TF39 744 aaPredicted RBP14.89□□□□□ -0.03
GPC3-202ENST00000394299 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.89□□□□□ -0.032e-6■■■■□ 23.7
GPC3-202ENST00000394299 BRD9Q9H8M2 597 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 STK39Q9UEW8 545 aa14.89□□□□□ -0.03
GPC3-202ENST00000394299 E7ENX8 843 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 CRCPO75575 148 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 HSPA1AP0DMV8 641 aaKnown RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 HSPA1BP0DMV9 641 aaKnown RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 HGFP14210 728 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 CD9P21926 228 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 GPX3P22352 226 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 GDF5P43026 501 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 MAPK8P45983 427 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 YBX1P67809 324 aaKnown RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 MESP2Q0VG99 397 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 KIF19Q2TAC6 998 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 REP15Q6BDI9 236 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 TPRG1Q6ZUI0 275 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 RBFAQ8N0V3 343 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 PGAM4Q8N0Y7 254 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 CDYL2Q8N8U2 506 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 OR2A12Q8NGT7 310 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 ITFG1Q8TB96 612 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 ECHDC3Q96DC8 303 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 APOL5Q9BWW9 433 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 NSUN3Q9H649 340 aaKnown RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 ADA2Q9NZK5 511 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 B4GALT6Q9UBX8 382 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 SLC25A13Q9UJS0 675 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 APPL1Q9UKG1 709 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 PCDHGA7Q9Y5G6 932 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 TRBV5-4A0A0C4DH59 114 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 MTX2O75431 263 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 SNRPB2P08579 225 aaKnown RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 ARL1P40616 181 aaPredicted RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 ERVPABLB-1P60509 514 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 B4GALNT1Q00973 533 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 LRP8Q14114 963 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 ZNF77Q15935 545 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 PHKG1Q16816 387 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 PRSS36Q5K4E3 855 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 LPCAT4Q643R3 524 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 DET1Q7L5Y6 550 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 C7orf61Q8IZ16 206 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 N4BP2L2Q92802 583 aaPredicted RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 RSRC1Q96IZ7 334 aaKnown RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 MRPL1Q9BYD6 325 aaKnown RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 NOL11Q9H8H0 719 aaKnown RBP14.88□□□□□ -0.03
GPC3-202ENST00000394299 CERS4Q9HA82 394 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 ELOVL2Q9NXB9 296 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 CACNA2D2Q9NY47 1150 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 TMPRSS11EQ9UL52 423 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 PCDHB1Q9Y5F3 818 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 COMMD10Q9Y6G5 202 aa14.88□□□□□ -0.03
GPC3-202ENST00000394299 STX16O14662 325 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 KATNA1O75449 491 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 POP4O95707 220 aaKnown RBP14.87□□□□□ -0.03
GPC3-202ENST00000394299 PSME3P61289 254 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 RALGDSQ12967 914 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 ARHGAP15Q53QZ3 475 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 MBOAT1Q6ZNC8 495 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 FRA10AC1Q70Z53 315 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 RETREG3Q86VR2 466 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 NXPE1Q8N323 547 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 OR2T11Q8NH01 316 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 ASB2Q96Q27 587 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 IL1RL2Q9HB29 575 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 NDE1Q9NXR1 346 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 ANGPTL2Q9UKU9 493 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 H3BNX3 289 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 ESRRBO95718 433 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 C1SP09871 688 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 HSPA7P48741 367 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 ZRSR2Q15696 482 aaKnown RBP14.87□□□□□ -0.03
GPC3-202ENST00000394299 VPS26BQ4G0F5 336 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 TCEAL5Q5H9L2 206 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 GRAMD4Q6IC98 578 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 LETMD1Q6P1Q0 360 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 KBTBD6Q86V97 674 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 GDPD5Q8WTR4 605 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 NUDT8Q8WV74 236 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 SCAMP4Q969E2 229 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 TEX37Q96LM6 180 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 PCDHAC1Q9H158 963 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 GNPTGQ9UJJ9 305 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 PRPF19Q9UMS4 504 aaKnown RBP14.87□□□□□ -0.03
GPC3-202ENST00000394299 LZTS1Q9Y250 596 aa14.87□□□□□ -0.03
GPC3-202ENST00000394299 KRT87PA6NCN2 255 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 TAPBPO15533 448 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 FFAR2O15552 330 aa14.86□□□□□ -0.03
GPC3-202ENST00000394299 FKBP6O75344 327 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms