RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 DHX9Q08211 1270 aaKnown RBP6.67□□□□□ -1.34
UBBP1-201ENST00000392399 DMPKQ09013 629 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 ILKQ13418 452 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 C1orf61Q13536 156 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 FRG1Q14331 258 aaKnown RBP6.67□□□□□ -1.34
UBBP1-201ENST00000392399 TRIP6Q15654 476 aaKnown RBP6.67□□□□□ -1.34
UBBP1-201ENST00000392399 LONRF1Q17RB8 773 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 BBS9Q3SYG4 887 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 BCL7AQ4VC05 210 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 SPANXN3Q5MJ09 141 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 FNBP1LQ5T0N5 605 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 RNF187Q5TA31 235 aaPredicted RBP6.67□□□□□ -1.34
UBBP1-201ENST00000392399 TMEM220Q6QAJ8 160 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 WASH2PQ6VEQ5 465 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 PACS1Q6VY07 963 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 CEP128Q6ZU80 1094 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 CENPUQ71F23 418 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 MARK2Q7KZI7 788 aaKnown RBP6.67□□□□□ -1.34
UBBP1-201ENST00000392399 TRIM74Q86UV6 250 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 AMZ2Q86W34 360 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 LRRC6Q86X45 466 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 NRROSQ86YC3 692 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 PIANPQ8IYJ0 282 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 EID2Q8N6I1 236 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 BEND7Q8N7W2 519 aaPredicted RBP6.67□□□□□ -1.34
UBBP1-201ENST00000392399 FAM46DQ8NEK8 389 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 GPR150Q8NGU9 434 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 CALML6Q8TD86 181 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 ART4Q93070 314 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 MFSD3Q96ES6 412 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 STAMBPL1Q96FJ0 436 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 LRRC1Q9BTT6 524 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 BOCQ9BWV1 1114 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 TSPYL1Q9H0U9 437 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 VPS37BQ9H9H4 285 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 WASH6PQ9NQA3 447 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 FAM114A2Q9NRY5 505 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 CATSPERZQ9NTU4 200 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 FTSJ1Q9UET6 329 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 SLC2A6Q9UGQ3 507 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 PCDHGA1Q9Y5H4 931 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 MAD1L1Q9Y6D9 718 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 TEX264Q9Y6I9 313 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 FAM169AQ9Y6X4 670 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 DCHS1Q96JQ0 3298 aa6.67□□□□□ -1.34
UBBP1-201ENST00000392399 GOLGA4Q13439 2230 aaKnown RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ZCWPW2A0A1B0GU75 182 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 CCDC78A2IDD5 438 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 EME2A4GXA9 379 aaPredicted RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 MGAT4DA6NG13 374 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 CCL22O00626 93 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 TRIM38O00635 465 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 PRMT5O14744 637 aaPredicted RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ZW10O43264 779 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 MTX2O75431 263 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 NDUFS3O75489 264 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 POP7O75817 140 aaKnown RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 KCNK5O95279 499 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 TRIM16O95361 564 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 FTH1P02794 183 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 GP1BAP07359 652 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 OR56A5P0C7T3 313 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 CKMT1AP12532 417 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 PNLIPP16233 465 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 OGNP20774 298 aaKnown RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 IDSP22304 550 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ACP1P24666 158 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 PMLP29590 882 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ACTR1BP42025 376 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 PRLHRP49683 370 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 PLTPP55058 493 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ADARP55265 1226 aaKnown RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ACTR1AP61163 376 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 DAB2P98082 770 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 B4GALNT1Q00973 533 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 E2F1Q01094 437 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ILF2Q12905 390 aaKnown RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 THOC5Q13769 683 aaKnown RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 NR0B2Q15466 257 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 DBN1Q16643 649 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 KCTD19Q17RG1 926 aaPredicted RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 INSCQ1MX18 579 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 DEFB133Q30KQ1 61 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 KHDC1Q4VXA5 237 aaKnown RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ZNF648Q5T619 568 aaPredicted RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 KCTD16Q68DU8 428 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 PSAPL1Q6NUJ1 521 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 NEPROQ6NW34 567 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ZNF449Q6P9G9 518 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 CES3Q6UWW8 571 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ABRAXAS1Q6UWZ7 409 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 CYS1Q717R9 158 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 C11orf96Q7Z7L8 435 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 C17orf82Q86X59 251 aaPredicted RBP6.66□□□□□ -1.34
UBBP1-201ENST00000392399 TRAPPC5Q8IUR0 188 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ZNF547Q8IVP9 402 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 ARL10Q8N8L6 244 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 RASGEF1AQ8N9B8 481 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 AVL9Q8NBF6 648 aa6.66□□□□□ -1.34
UBBP1-201ENST00000392399 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms