RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 DNAJC1Q96KC8 554 aaKnown RBP12.47□□□□□ -0.41
GGPS1-203ENST00000391855 COPS8Q99627 209 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 UCK1Q9HA47 277 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 EPB41L5Q9HCM4 733 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 POT1Q9NUX5 634 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 KCNK4Q9NYG8 393 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 AKAP7Q9P0M2 348 aaPredicted RBP12.47□□□□□ -0.41
GGPS1-203ENST00000391855 KCTD3Q9Y597 815 aa12.47□□□□□ -0.41
GGPS1-203ENST00000391855 IGHV1OR21-1A0A087WYE8 117 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 TRBV5-4A0A0C4DH59 114 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 MROH6A6NGR9 719 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 TAF4O00268 1085 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 PPM1DO15297 605 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 GPR39O43194 453 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 B4GAT1O43505 415 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 POP7O75817 140 aaKnown RBP12.46□□□□□ -0.41
GGPS1-203ENST00000391855 EML2O95834 649 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 MPOP05164 745 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 APRTP07741 180 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 XRCC1P18887 633 aaPredicted RBP12.46□□□□□ -0.41
GGPS1-203ENST00000391855 ADRA1DP25100 572 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 CTSCP53634 463 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 OR1D5P58170 312 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 UBE2IP63279 158 aaKnown RBP12.46□□□□□ -0.41
GGPS1-203ENST00000391855 TMPRSS15P98073 1019 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 CDK16Q00536 496 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 ZFP36L1Q07352 338 aaKnown RBP12.46□□□□□ -0.41
GGPS1-203ENST00000391855 ARMC3Q5W041 872 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 TMEM220Q6QAJ8 160 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 SLITRK4Q8IW52 837 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 TRIM48Q8IWZ4 208 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 PRELID2Q8N945 189 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 FGF11Q92914 225 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.46□□□□□ -0.41
GGPS1-203ENST00000391855 AHCYL2Q96HN2 611 aaKnown RBP12.46□□□□□ -0.41
GGPS1-203ENST00000391855 LINC00615Q96LM1 132 aaPredicted RBP12.46□□□□□ -0.41
GGPS1-203ENST00000391855 CMKLR1Q99788 373 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 MFRPQ9BY79 579 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 ZMYND15Q9H091 742 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 VPS37BQ9H9H4 285 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 CASS4Q9NQ75 786 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 PRDM8Q9NQV8 689 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 ZDHHC3Q9NYG2 299 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 CPNE7Q9UBL6 633 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 SLC23A2Q9UGH3 650 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 SATB2Q9UPW6 733 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 DNAJC16Q9Y2G8 782 aa12.46□□□□□ -0.41
GGPS1-203ENST00000391855 GOLGA6L10A0A0M3HER8 536 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 MGAT4DA6NG13 374 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 QSOX1O00391 747 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 PLD2O14939 933 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 HGSO14964 777 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-203ENST00000391855 RRP8O43159 456 aaKnown RBP12.45□□□□□ -0.42
GGPS1-203ENST00000391855 VIPP01282 170 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 ITGA2BP08514 1039 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 GSTM1P09488 218 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 ETS1P14921 441 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 TPH1P17752 444 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 TCP1P17987 556 aaKnown RBP12.45□□□□□ -0.42
GGPS1-203ENST00000391855 TPSB2P20231 275 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 CD1CP29017 333 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 PCBP4P57723 403 aaKnown RBP12.45□□□□□ -0.42
GGPS1-203ENST00000391855 BASP1P80723 227 aaKnown RBP12.45□□□□□ -0.42
GGPS1-203ENST00000391855 GSTM4Q03013 218 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 CACNG1Q06432 222 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 ITIH4Q14624 930 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 TPSAB1Q15661 275 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 CYP1B1Q16678 543 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 AMZ1Q400G9 498 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 ZRANB3Q5FWF4 1079 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 RAB11FIP2Q7L804 512 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 B3GNT8Q7Z7M8 397 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 FBXO39Q8N4B4 442 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 BEND7Q8N7W2 519 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-203ENST00000391855 GLIS1Q8NBF1 620 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 PPHLN1Q8NEY8 458 aaKnown RBP12.45□□□□□ -0.42
GGPS1-203ENST00000391855 OR4D9Q8NGE8 314 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 ACTRT1Q8TDG2 376 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 CDKN2AIPNLQ96HQ2 116 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 OSBPL9Q96SU4 736 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 TTC1Q99614 292 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 ATXN7L1Q9ULK2 861 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-203ENST00000391855 RAXQ9Y2V3 346 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-203ENST00000391855 IGLV3-16A0A075B6K0 115 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 TRBV23OR9-2A0A075B6M9 112 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 A0A087WV48 116 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 OR2AG2A6NM03 316 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 F8W8V4 182 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 AP2A2O94973 939 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 JMJD7P0C870 316 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 ACRV1P26436 265 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 KCNJ1P48048 391 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 PRLHRP49683 370 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 LIMK2P53671 638 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 ACVR1Q04771 509 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 FNBP1LQ5T0N5 605 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 PHF19Q5T6S3 580 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 TSTD2Q5T7W7 516 aa12.45□□□□□ -0.42
GGPS1-203ENST00000391855 LYPLAL1Q5VWZ2 237 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms