RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 KLHL26Q53HC5 615 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PDSS2Q86YH6 399 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SLAIN1Q8ND83 568 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TCTEX1D2Q8WW35 142 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ALG3Q92685 438 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 KCNS3Q9BQ31 491 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 NKIRAS2Q9NYR9 191 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 AKAP7Q9P0M2 348 aaPredicted RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 PLEKHA6Q9Y2H5 1048 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SDK1Q7Z5N4 2213 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 CHD5Q8TDI0 1954 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TDRD15B5MCY1 1934 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 FXYD6-FXYD2A0A087WZ82 144 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 C3orf70A6NLC5 250 aaPredicted RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 M0QYT0 321 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PTPN1P18031 435 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 NOMO3P69849 1222 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PTSQ03393 145 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ACSBG2Q5FVE4 666 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 AGAP9Q5VTM2 703 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ZDHHC17Q8IUH5 632 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 CEP97Q8IW35 865 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 NFKBIZQ9BYH8 718 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 FXYD6Q9H0Q3 95 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ZNF646O15015 1829 aaPredicted RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 NARSO43776 548 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 CILPO75339 1184 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 HTRA4P83105 476 aaPredicted RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 B3GNT9Q6UX72 402 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PCDH20Q8N6Y1 951 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 PNO1Q9NRX1 252 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 CLN6Q9NWW5 311 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TRUB2O95900 331 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 USP17L7P0C7H9 530 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PGAM1P18669 254 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TOMM20Q15388 145 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TPRG1LQ5T0D9 272 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 DUPD1Q68J44 220 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TMPRSS11AQ6ZMR5 421 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 CXXC5Q7LFL8 322 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 UBE2J2Q8N2K1 259 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 LRRC52Q8N7C0 313 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SLC37A3Q8NCC5 494 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ZNF420Q8TAQ5 688 aaPredicted RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 PIWIL2Q8TC59 973 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 PHOX2BQ99453 314 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PPM1HQ9ULR3 514 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SSR3Q9UNL2 185 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 CFL2Q9Y281 166 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 PADI2Q9Y2J8 665 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 BCLAF3A2AJT9 711 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 PRR5-ARHGAP8B1AHC4 643 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 GMDSO60547 372 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 AP2A1O95782 977 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SLC2A3P11169 496 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 STOMP27105 288 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ZNF143P52747 638 aaPredicted RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 ARHGAP8P85298 464 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 AADACL2Q6P093 401 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 OR4C6Q8NH72 309 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 FBXO32Q969P5 355 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 C11orf24Q96F05 449 aaPredicted RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 CGREF1Q99674 301 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 RNF208Q9H0X6 261 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 MAT2BQ9NZL9 334 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 EIF3FO00303 357 aaPredicted RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 RFPL2O75678 378 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 RNASEH2AO75792 299 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 AP2A2O94973 939 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 FSHRP23945 695 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 CYP2F1P24903 491 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 MIPP30301 263 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SOAT1P35610 550 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 AFF1P51825 1210 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 GALK2Q01415 458 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 RELAQ04206 551 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 DLG2Q15700 870 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 LRRC38Q5VT99 294 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SSX9Q7RTT3 188 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 SLFN11Q7Z7L1 901 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 REXO5Q96IC2 774 aaKnown RBP6.53□□□□□ -1.36
CHD6-203ENST00000373233 BBS4Q96RK4 519 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 CPNE1Q99829 537 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 APOL5Q9BWW9 433 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 LHX5Q9H2C1 402 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 DSN1Q9H410 356 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TMEM9Q9P0T7 183 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 CABIN1Q9Y6J0 2220 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 KANTRA0A1W2PQU2 76 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 DYRK3O43781 588 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 ZNF35P13682 527 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 AP3S2P59780 193 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 MORN1Q5T089 497 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 UBXN11Q5T124 520 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TIGD3Q6B0B8 471 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 HERC6Q8IVU3 1022 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 TMEM192Q8IY95 271 aa6.53□□□□□ -1.36
CHD6-203ENST00000373233 CATSPERBQ9H7T0 1116 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms