RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SEPT7Q16181 437 aaKnown RBP14.61□□□□□ -0.07
COL9A1-204ENST00000370496 C14orf28Q4W4Y0 310 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 LYPLAL1Q5VWZ2 237 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 KIAA0930Q6ICG6 404 aaPredicted RBP14.61□□□□□ -0.07
COL9A1-204ENST00000370496 EFL1Q7Z2Z2 1120 aaKnown RBP14.61□□□□□ -0.07
COL9A1-204ENST00000370496 IFI44Q8TCB0 444 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 NAT14Q8WUY8 206 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 SGF29Q96ES7 293 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 CCDC97Q96F63 343 aaPredicted RBP14.61□□□□□ -0.07
COL9A1-204ENST00000370496 TRIM56Q9BRZ2 755 aaKnown RBP14.61□□□□□ -0.07
COL9A1-204ENST00000370496 VPS37BQ9H9H4 285 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 SPATS2LQ9NUQ6 558 aaKnown RBP14.61□□□□□ -0.07
COL9A1-204ENST00000370496 IGLV3-16A0A075B6K0 115 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 LY6G6EA0A0G2JKS1 128 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 MAGEB16A2A368 324 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 PCNX2A6NKB5 2137 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 BANF1O75531 89 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 ATP1B2P14415 290 aaPredicted RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 SLC2A4P14672 509 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 NSG1P42857 185 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 TTPAP49638 278 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 PRLHRP49683 370 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 BCL7AQ4VC05 210 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 GUSBP11Q6P575 273 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 PACS1Q6VY07 963 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 CERS6Q6ZMG9 384 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 AMZ2Q86W34 360 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 BEND7Q8N7W2 519 aaPredicted RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 CEP112Q8N8E3 955 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 PNPLA1Q8N8W4 532 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 SGSM3Q96HU1 749 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 TOR4AQ9NXH8 423 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 WHRNQ9P202 907 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 MARCH4Q9P2E8 410 aaPredicted RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 SLC23A2Q9UGH3 650 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 PADI4Q9UM07 663 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 PCDHGA1Q9Y5H4 931 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 U3KQA8 63 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 ARHGEF17Q96PE2 2063 aaPredicted RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 GOLGA4Q13439 2230 aaKnown RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 GOLGA8KD6RF30 607 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 GOLGA8TH3BQL2 631 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 QSOX1O00391 747 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 CD3EAPO15446 510 aaKnown RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 NOBOXO60393 691 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 POP7O75817 140 aaKnown RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 USP1O94782 785 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 POLBP06746 335 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 PMLP29590 882 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 MAZP56270 477 aaKnown RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 ILKQ13418 452 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 SEMA3AQ14563 771 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 CRYMQ14894 314 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 ANKRD20A4Q4UJ75 823 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 DNTTIP2Q5QJE6 756 aaKnown RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 DUPD1Q68J44 220 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 MRNIPQ6NTE8 343 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 ERMP1Q7Z2K6 904 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 C11orf96Q7Z7L8 435 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 SFTPA2Q8IWL1 248 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 AGGF1Q8N302 714 aaeCLIP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 GPR156Q8NFN8 814 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 MAPK15Q8TD08 544 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 PATE1Q8WXA2 126 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 CCDC74AQ96AQ1 378 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 SIGLEC10Q96LC7 697 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 PWWP2AQ96N64 755 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 NAT9Q9BTE0 207 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 STN1Q9H668 368 aaKnown RBP14.6□□□□□ -0.07
COL9A1-204ENST00000370496 SYNDIG1Q9H7V2 258 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 TBC1D29Q9UFV1 150 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 CHMP2BQ9UQN3 213 aa14.6□□□□□ -0.07
COL9A1-204ENST00000370496 F8W8V4 182 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 PFDN6O15212 129 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 AP2A2O94973 939 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 TRIM16O95361 564 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 GP1BAP07359 652 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 F3P13726 295 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 IDSP22304 550 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 ARNTP27540 789 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 CLCNKAP51800 687 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 SLC7A5Q01650 507 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 DMPKQ09013 629 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 FOXC1Q12948 553 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 THOC5Q13769 683 aaKnown RBP14.59□□□□□ -0.07
COL9A1-204ENST00000370496 HLTFQ14527 1009 aaKnown RBP eCLIP14.59□□□□□ -0.07
COL9A1-204ENST00000370496 LONRF1Q17RB8 773 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 MSS51Q4VC12 460 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 N4BP2L1Q5TBK1 243 aaPredicted RBP14.59□□□□□ -0.07
COL9A1-204ENST00000370496 ZNF470Q6ECI4 717 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 SDCCAG8Q86SQ7 713 aaPredicted RBP14.59□□□□□ -0.07
COL9A1-204ENST00000370496 LDB1Q86U70 411 aaPredicted RBP14.59□□□□□ -0.07
COL9A1-204ENST00000370496 TMEM135Q86UB9 458 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 SLCO6A1Q86UG4 719 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 NAGSQ8N159 534 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 CLDN19Q8N6F1 224 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 OR6C4Q8NGE1 309 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 HM13Q8TCT9 377 aa14.59□□□□□ -0.07
COL9A1-204ENST00000370496 SLC37A2Q8TED4 501 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms