RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TMEM120AQ9BXJ8 343 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF230Q9UIE0 474 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 SIT1Q9Y3P8 196 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TM9SF1O15321 606 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 NARSO43776 548 aaKnown RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 ALDH9A1P49189 494 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 CLK2P49760 499 aaKnown RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TUBP50607 506 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 MROH9Q5TGP6 573 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 HECTD2Q5U5R9 776 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 UBE2R2Q712K3 238 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF551Q7Z340 670 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 FAM20CQ8IXL6 584 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF671Q8TAW3 534 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 SPOCK2Q92563 424 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TMEM74Q96NL1 305 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 CHP1Q99653 195 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 DGCR6LQ9BY27 220 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 WDR26Q9H7D7 661 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 L2HGDHQ9H9P8 463 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 RNPEPL1Q9HAU8 725 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 SCPEP1Q9HB40 452 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 IMP3Q9NV31 184 aaKnown RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TRPS1Q9UHF7 1281 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 HMX3A6NHT5 357 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 G3V2T6 193 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TLR5O60602 858 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 CLDN11O75508 207 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 SCGNO76038 276 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 OR5F1O95221 314 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 CYP1A1P04798 512 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 SPATA31D3P0C874 917 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 MATKP42679 507 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 C1orf189Q5VU69 101 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 BICRALQ6AI39 1079 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 MFSD5Q6N075 450 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 CASP12Q6UXS9 341 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 SPATA31D4Q6ZUB0 917 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 RHOUQ7L0Q8 258 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 MON1AQ86VX9 555 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TMEM126BQ8IUX1 230 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 FAM3CQ92520 227 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 MED8Q96G25 268 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 WDR12Q9GZL7 423 aaKnown RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 RDH8Q9NYR8 311 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 PHF11Q9UIL8 331 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 NT5C1B-RDH14C9J2C7 533 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 TM7SF2O76062 418 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 LARGE1O95461 756 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 GNAO1P09471 354 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 ITPKBP27987 946 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 RPS3AP61247 264 aaKnown RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 SLC35G2Q8TBE7 412 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 DCAKDQ8WVC6 231 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 HAVCR1Q96D42 359 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 NT5MQ9NPB1 228 aa8.57□□□□□ -1.04
SYNE1-206ENST00000367253 PNMA8BQ9ULN7 279 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-206ENST00000367253 A0A1B0GTH6 734 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 TFECO14948 347 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 DUX1O43812 170 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 NOS3P29474 1203 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 AFF1P51825 1210 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 HK2P52789 917 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 GALCP54803 685 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 RAB4BP61018 213 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PLP2Q04941 152 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 FAM46DQ8NEK8 389 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 CCDC54Q8NEL0 328 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 TSPAN14Q8NG11 270 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 TRPC4APQ8TEL6 797 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PROX1Q92786 737 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 NAT9Q9BTE0 207 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 KCNQ5Q9NR82 932 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PCDHB16Q9NRJ7 776 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 MED16Q9Y2X0 877 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 SPIN1Q9Y657 262 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 LRRC37A3O60309 1634 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 GSG1L2A8MUP6 293 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 VILLO15195 856 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 DCXO43602 365 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 MGRN1O60291 552 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 ADH1BP00325 375 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PAICSP22234 425 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 TGM4P49221 684 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 OLFML2AQ68BL7 652 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 FIP1L1Q6UN15 594 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 DHFR2Q86XF0 187 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 TMC8Q8IU68 726 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PPIL6Q8IXY8 311 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 WDSUB1Q8N9V3 476 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 LCN9Q8WX39 176 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 MRM3Q9HC36 420 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 FARSAQ9Y285 508 aaKnown RBP8.56□□□□□ -1.04
SYNE1-206ENST00000367253 BCL9LQ86UU0 1499 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 NEDD4P46934 1319 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 LOC100506127A0A0U1RQW1 187 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 FAM170BA6NMN3 283 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 OR5K4A6NMS3 321 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 PLA2G6O60733 806 aa8.56□□□□□ -1.04
SYNE1-206ENST00000367253 USP2O75604 605 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms