RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 CYP3A43Q9HB55 503 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 SALL1Q9NSC2 1324 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 PPM1AP35813 382 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 DEFA6Q01524 100 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 CFAP206Q8IYR0 622 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 MARVELD2Q8N4S9 558 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 CHST4Q8NCG5 386 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 EDEM1Q92611 657 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 RERGQ96A58 199 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 ITCHQ96J02 903 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 AP1S3Q96PC3 154 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 PGLYRP2Q96PD5 576 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 PCDHB16Q9NRJ7 776 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 SCN9AQ15858 1988 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 E9PI62 339 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 SERPINF2P08697 491 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 BUD31P41223 144 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 CASP9P55211 416 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 PMS2P3Q13401 168 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 GALEQ14376 348 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 VASH1Q7L8A9 365 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 OR2L3Q8NG85 312 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 BHMG1C9JSJ3 638 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 KCNK1O00180 336 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 RB1P06400 928 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 CRABP2P29373 138 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 MLLT3P42568 568 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF410Q86VK4 478 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 TGIF2Q9GZN2 237 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 PCDHAC1Q9H158 963 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 PRMT7Q9NVM4 692 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 RBM22Q9NW64 420 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■■□ 19.3
CDC42BPA-205ENST00000366769 ADAMTS6Q9UKP5 1117 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 CSH1P0DML2 217 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 CSH2P0DML3 217 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 PRKD1Q15139 912 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 INSCQ1MX18 579 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 PPP1R26Q5T8A7 1209 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 ACTRT2Q8TDY3 377 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 SNAPC3Q92966 411 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNHIT2Q9UHR6 403 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 RNF6Q9Y252 685 aa10.98□□□□□ -0.65
CDC42BPA-205ENST00000366769 C17orf102A2RUQ5 167 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 APOC1P02654 83 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 NRG1Q02297 640 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF234Q14588 700 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 CRTC2Q53ET0 693 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PIAS4Q8N2W9 510 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 RELTQ969Z4 430 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PPA2Q9H2U2 334 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 POU2F3Q9UKI9 436 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 OAS3Q9Y6K5 1087 aaKnown RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 FTH1P02794 183 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 DNASE1L1P49184 302 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PIGFQ07326 219 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 TMEM198Q66K66 360 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PAOXQ6QHF9 649 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 GPR65Q8IYL9 337 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 SLC43A3Q8NBI5 491 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 OR52J3Q8NH60 311 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 JSRP1Q96MG2 331 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PRICKLE1Q96MT3 831 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 TAS2R3Q9NYW6 316 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 MYO7BQ6PIF6 2116 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 NAGLUP54802 743 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 TAS2R41P59536 307 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 NDUFAF5Q5TEU4 345 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 IGFN1Q86VF2 1251 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PHTF2Q8N3S3 785 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PCNPQ8WW12 178 aaKnown RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 ATG10Q9H0Y0 220 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 KCNN2Q9H2S1 579 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 IFT172Q9UG01 1749 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 AQP1P29972 269 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 OPRL1P41146 370 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 ATXN1P54253 815 aaKnown RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 FGL1Q08830 312 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 LAPTM5Q13571 262 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 KATNAL2Q8IYT4 538 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 LPGAT1Q92604 370 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PRR11Q96HE9 360 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 MTFR1LQ9H019 292 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PLK4O00444 970 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 BTN3A1O00481 513 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 PGRMC2O15173 223 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 MERTKQ12866 999 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 KCNJ8Q15842 424 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF773Q6PK81 442 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 SYT12Q8IV01 421 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF433Q8N7K0 673 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 GPRC5AQ8NFJ5 357 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 CD320Q9NPF0 282 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 IGSF9BQ9UPX0 1349 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 CSDE1O75534 798 aaKnown RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 NR2F1P10589 423 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 WDR4P57081 412 aaKnown RBP10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 HERVK_113P63132 956 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 GK3PQ14409 553 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 SYT16Q17RD7 645 aa10.97□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF181Q2M3W8 571 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms