RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CHRNA1P02708 482 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 OCM2P0CE71 109 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 OCMP0CE72 109 aaPredicted RBP17.52■□□□□ 0.39
RTN4-204ENST00000357732 ETFBP38117 255 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 KCNC4Q03721 635 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 SVOPLQ8N434 492 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 ITFG1Q8TB96 612 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 ITPKCQ96DU7 683 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 TMEM74Q96NL1 305 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 TRIB3Q96RU7 358 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 SEPHS2Q99611 448 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 BCL7BQ9BQE9 202 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 FEM1AQ9BSK4 669 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 TLR9Q9NR96 1032 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 INTS7Q9NVH2 962 aaKnown RBP17.52■□□□□ 0.39
RTN4-204ENST00000357732 USE1Q9NZ43 259 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 ARIH1Q9Y4X5 557 aaPredicted RBP17.52■□□□□ 0.39
RTN4-204ENST00000357732 TDRD15B5MCY1 1934 aaKnown RBP17.52■□□□□ 0.39
RTN4-204ENST00000357732 UBA6A0AVT1 1052 aaPredicted RBP17.51■□□□□ 0.39
RTN4-204ENST00000357732 NDUFS3O75489 264 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 CLPXO76031 633 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 ZBTB11O95625 1053 aaPredicted RBP17.51■□□□□ 0.39
RTN4-204ENST00000357732 GGT1P19440 569 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 CRHBPP24387 322 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 EEF1B2P24534 225 aaKnown RBP17.51■□□□□ 0.39
RTN4-204ENST00000357732 BMXP51813 675 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 PLCL1Q15111 1095 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 RBBP7Q16576 425 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 SPRYD7Q5W111 196 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 FBXL22Q6P050 247 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 DLEU7Q6UYE1 221 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 ZDHHC13Q8IUH4 622 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 FNDC5Q8NAU1 212 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
RTN4-204ENST00000357732 FANCEQ9HB96 536 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 ZNF225Q9UK10 706 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 SYNCRIPO60506 623 aaKnown RBP17.51■□□□□ 0.39
RTN4-204ENST00000357732 MATN1P21941 496 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 OR4D2P58180 307 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 BNIP3Q12983 259 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 PWP1Q13610 501 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 TAF1AQ15573 450 aaPredicted RBP17.51■□□□□ 0.39
RTN4-204ENST00000357732 TGFBIQ15582 683 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 NFE2Q16621 373 aaPredicted RBP17.51■□□□□ 0.39
RTN4-204ENST00000357732 SMU1Q2TAY7 513 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 ANKDD1AQ495B1 522 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 XAF1Q6GPH4 301 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 NIPAL1Q6NVV3 410 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 TBPL2Q6SJ96 375 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 PJA1Q8NG27 643 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 TANKQ92844 425 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 TMBIM1Q969X1 311 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 PDFQ9HBH1 243 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 PAIP2BQ9ULR5 123 aaKnown RBP17.51■□□□□ 0.39
RTN4-204ENST00000357732 COQ6Q9Y2Z9 468 aa17.51■□□□□ 0.39
RTN4-204ENST00000357732 A0A0U1RQF3 1178 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 F8W810 466 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 BTN3A1O00481 513 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 JAK1P23458 1154 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 IL12AP29459 219 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 CLCN4P51793 760 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 TRAF2Q12933 501 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 GTF2IRD2BQ6EKJ0 949 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 GRAMD4Q6IC98 578 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 GTF2IRD2Q86UP8 949 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 CLEC4FQ8N1N0 589 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 OR2T11Q8NH01 316 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 IGSF8Q969P0 613 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 GLT1D1Q96MS3 346 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 CGREF1Q99674 301 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 MGME1Q9BQP7 344 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 TRIM8Q9BZR9 551 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 IL37Q9NZH6 218 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 DNAJB9Q9UBS3 223 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 FAM50BQ9Y247 325 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 TDRKHQ9Y2W6 561 aaKnown RBP17.5■□□□□ 0.39
RTN4-204ENST00000357732 CDC7O00311 574 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 E2F3O00716 465 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 MGEA5O60502 916 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 SULT1C4O75897 302 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 ITGB1P05556 798 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 CD247P20963 164 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 FMO4P31512 558 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 TTPAP49638 278 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 ECT2LQ008S8 904 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 CBX3Q13185 183 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 GALNT3Q14435 633 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 GDF6Q6KF10 455 aaPredicted RBP17.5■□□□□ 0.39
RTN4-204ENST00000357732 XKR5Q6UX68 686 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 GPSM1Q86YR5 675 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 SCN4BQ8IWT1 228 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 DTWD1Q8N5C7 304 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 SNX19Q92543 992 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 GPR21Q99679 349 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 NAA50Q9GZZ1 169 aaKnown RBP17.5■□□□□ 0.39
RTN4-204ENST00000357732 SMPD4Q9NXE4 827 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 NUDT4Q9NZJ9 180 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 TNPO3Q9Y5L0 923 aaKnown RBP17.5■□□□□ 0.39
RTN4-204ENST00000357732 ST14Q9Y5Y6 855 aa17.5■□□□□ 0.39
RTN4-204ENST00000357732 DOCK3Q8IZD9 2030 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms