RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 NKX1-2Q9UD57 310 aaPredicted RBP18.26■□□□□ 0.51
TRIM41-202ENST00000351937 RGSL1A5PLK6 1076 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 CDK14O94921 469 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 PRNPP04156 253 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 RPS17P08708 135 aaKnown RBP18.26■□□□□ 0.51
TRIM41-202ENST00000351937 ITGB6P18564 788 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 TSPAN8P19075 237 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 CLCQ05315 142 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 KLF10Q13118 480 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 NAA25Q14CX7 972 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 FNDC3BQ53EP0 1204 aaKnown RBP18.26■□□□□ 0.51
TRIM41-202ENST00000351937 HSD11B1LQ7Z5J1 315 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 MYO1HQ8N1T3 1032 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 CPA6Q8N4T0 437 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 RBM15BQ8NDT2 890 aaKnown RBP18.26■□□□□ 0.51
TRIM41-202ENST00000351937 N4BP2L2Q92802 583 aaPredicted RBP18.26■□□□□ 0.51
TRIM41-202ENST00000351937 MCUR1Q96AQ8 359 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 PANX3Q96QZ0 392 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 GDF15Q99988 308 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 NSUN3Q9H649 340 aaKnown RBP18.26■□□□□ 0.51
TRIM41-202ENST00000351937 SMOXQ9NWM0 555 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 NUDT4Q9NZJ9 180 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 NOP53Q9NZM5 478 aaKnown RBP18.26■□□□□ 0.51
TRIM41-202ENST00000351937 NFKBIL1Q9UBC1 381 aaPredicted RBP18.26■□□□□ 0.51
TRIM41-202ENST00000351937 FIS1Q9Y3D6 152 aa18.26■□□□□ 0.51
TRIM41-202ENST00000351937 LRRC14BA6NHZ5 514 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 LINC01565O15544 149 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 MAGEC1O60732 1142 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 HK3P52790 923 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 COPAP53621 1224 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 LCP2Q13094 533 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 TGFBIQ15582 683 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 HNRNPA1L2Q32P51 320 aaKnown RBP18.25■□□□□ 0.51
TRIM41-202ENST00000351937 ERAP2Q6P179 960 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 ARHGAP24Q8N264 748 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 ST13P5Q8NFI4 369 aaPredicted RBP18.25■□□□□ 0.51
TRIM41-202ENST00000351937 SPATA16Q9BXB7 569 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 ZNF385DQ9H6B1 395 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 SLC24A3Q9HC58 644 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 CD274Q9NZQ7 290 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 EDDM13A0A1B0GTR0 161 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 NCF1BA6NI72 391 aaPredicted RBP18.25■□□□□ 0.51
TRIM41-202ENST00000351937 NCF1CA8MVU1 366 aaPredicted RBP18.25■□□□□ 0.51
TRIM41-202ENST00000351937 SKAP2O75563 359 aaPredicted RBP18.25■□□□□ 0.51
TRIM41-202ENST00000351937 NCF1P14598 390 aaPredicted RBP18.25■□□□□ 0.51
TRIM41-202ENST00000351937 B4GALNT1Q00973 533 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 TTLL9Q3SXZ7 439 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 DNAL1Q4LDG9 190 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 TMIEQ8NEW7 156 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 NAT14Q8WUY8 206 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 MID1IP1Q9NPA3 183 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 MRGBPQ9NV56 204 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 CD84Q9UIB8 345 aa18.25■□□□□ 0.51
TRIM41-202ENST00000351937 PEX11AO75192 247 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 C9orf64Q5T6V5 341 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 TLDC1Q6P9B6 456 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 SBSNQ6UWP8 590 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 FRA10AC1Q70Z53 315 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 TERB1Q8NA31 727 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 TRPC4APQ8TEL6 797 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 NSUN5Q96P11 429 aaKnown RBP18.24■□□□□ 0.51
TRIM41-202ENST00000351937 DENND2DQ9H6A0 471 aaPredicted RBP18.24■□□□□ 0.51
TRIM41-202ENST00000351937 C15orf41Q9Y2V0 281 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 RPSAP08865 295 aaKnown RBP18.24■□□□□ 0.51
TRIM41-202ENST00000351937 OR56A5P0C7T3 313 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 CBSLP0DN79 551 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 PAX7P23759 505 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 CBSP35520 551 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 MMP12P39900 470 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 MXRA7P84157 204 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 RALGDSQ12967 914 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 RUNX3Q13761 415 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 UGT3A2Q3SY77 523 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 ATAT1Q5SQI0 421 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 Q6ZVL8 140 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 FBXO27Q8NI29 283 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 ZNF483Q8TF39 744 aaPredicted RBP18.24■□□□□ 0.51
TRIM41-202ENST00000351937 KCTD5Q9NXV2 234 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 TMPRSS11EQ9UL52 423 aa18.24■□□□□ 0.51
TRIM41-202ENST00000351937 KPNA3O00505 521 aaPredicted RBP18.23■□□□□ 0.51
TRIM41-202ENST00000351937 AZIN1O14977 448 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 MLYCDO95822 493 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 ACSBG2Q5FVE4 666 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 CLEC6AQ6EIG7 209 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 PARS2Q7L3T8 475 aaKnown RBP18.23■□□□□ 0.51
TRIM41-202ENST00000351937 YAF2Q8IY57 180 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 TRAM1L1Q8N609 369 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 POU5F2Q8N7G0 328 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 OR8D1Q8WZ84 308 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 FAM126AQ9BYI3 521 aaPredicted RBP18.23■□□□□ 0.51
TRIM41-202ENST00000351937 PCTPQ9UKL6 214 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 PPP6CO00743 305 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 COX4I1P13073 169 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 PGM1P36871 562 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 ETV3P41162 512 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 ELAVL3Q14576 367 aaKnown RBP18.23■□□□□ 0.51
TRIM41-202ENST00000351937 SCAMP4Q969E2 229 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 ZSCAN5AQ9BUG6 496 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 TMEM245Q9H330 911 aa18.23■□□□□ 0.51
TRIM41-202ENST00000351937 SARDHQ9UL12 918 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms