RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 DPTQ07507 201 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 TSNQ15631 228 aaKnown RBP18.43■□□□□ 0.54
PTN-201ENST00000348225 SMAD2Q15796 467 aaKnown RBP18.43■□□□□ 0.54
PTN-201ENST00000348225 TRIM67Q6ZTA4 783 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 CCDC121Q6ZUS5 278 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 NLRP8Q86W28 1048 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 PHYKPLQ8IUZ5 450 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 MYO1HQ8N1T3 1032 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 HDDC3Q8N4P3 179 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 AADATQ8N5Z0 425 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 IL17RCQ8NAC3 791 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 EXT2Q93063 718 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 CNDP1Q96KN2 507 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 CDX2Q99626 313 aaPredicted RBP18.43■□□□□ 0.54
PTN-201ENST00000348225 TMEM120AQ9BXJ8 343 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 ILKAPQ9H0C8 392 aaPredicted RBP18.43■□□□□ 0.54
PTN-201ENST00000348225 COQ6Q9Y2Z9 468 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 RAP2CQ9Y3L5 183 aa18.43■□□□□ 0.54
PTN-201ENST00000348225 SUPT3HB4E1H0 165 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 CDC7O00311 574 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 SUPT3HO75486 399 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 KLF8O95600 359 aaPredicted RBP18.42■□□□□ 0.54
PTN-201ENST00000348225 FOSL2P15408 326 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 IMPDH1P20839 514 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 KCNC1P48547 511 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 HK2P52789 917 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 COPAP53621 1224 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 RPS14P62263 151 aaKnown RBP18.42■□□□□ 0.54
PTN-201ENST00000348225 PRKAA1Q13131 559 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 SETDB1Q15047 1291 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 FBXO43Q4G163 708 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 AGBL4Q5VU57 503 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 ADAMTSL2Q86TH1 951 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 CACUL1Q86Y37 369 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 PPM1EQ8WY54 764 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 PHF21BQ96EK2 531 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 L3HYPDHQ96EM0 354 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 RMDN2Q96LZ7 410 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 TMEM237Q96Q45 408 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 PIKFYVEQ9Y2I7 2098 aa18.42■□□□□ 0.54
PTN-201ENST00000348225 UBXN8O00124 270 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 EIF3FO00303 357 aaPredicted RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 KPNA5O15131 536 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 FTH1P02794 183 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 DNTTP04053 509 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 ASGR2P07307 311 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 GFAPP14136 432 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 ARRB2P32121 409 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 GLIPR1L2Q4G1C9 344 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 RAET1GQ6H3X3 334 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 DET1Q7L5Y6 550 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 GBP7Q8N8V2 638 aaPredicted RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 NAT14Q8WUY8 206 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 FUBP1Q96AE4 644 aaKnown RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 ZCCHC2Q9C0B9 1178 aaKnown RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 WWP1Q9H0M0 922 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 STN1Q9H668 368 aaKnown RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 EML4Q9HC35 981 aaKnown RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 RNASEH2AO75792 299 aaKnown RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 ENO3P13929 434 aaPredicted RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 GPR1P46091 355 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 AQP5P55064 265 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 HERVK_113P63132 956 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 LEXMQ3ZCV2 418 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 HSF5Q4G112 596 aaPredicted RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 ARL13AQ5H913 290 aaPredicted RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 KIAA1211LQ6NV74 962 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 FRA10AC1Q70Z53 315 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 GPSM1Q86YR5 675 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 FBXO39Q8N4B4 442 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 PTGR2Q8N8N7 351 aaPredicted RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 TRMOQ9BU70 441 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 ERVK-6Q9BXR3 956 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 KDM4CQ9H3R0 1056 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 KCNK13Q9HB14 408 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 SLC2A4RGQ9NR83 387 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 PNPOQ9NVS9 261 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 SCML1Q9UN30 329 aa18.41■□□□□ 0.54
PTN-201ENST00000348225 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.41■□□□□ 0.54
PTN-201ENST00000348225 A0A1W2PP55 124 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 ADAM23O75077 832 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 MTX2O75431 263 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 TM7SF2O76062 418 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 CHRNGP07510 517 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 SRFP11831 508 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 MTHFD2P13995 350 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 NAA20P61599 178 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 ZNF678Q5SXM1 525 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 KIRREL3Q8IZU9 778 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 ZNF781Q8N8C0 355 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 GANCQ8TET4 914 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 CCT6BQ92526 530 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 LRRC37BQ96QE4 947 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 ABCF3Q9NUQ8 709 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 NUDT4Q9NZJ9 180 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 HAO1Q9UJM8 370 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 IKZF3Q9UKT9 509 aa18.4■□□□□ 0.54
PTN-201ENST00000348225 A0A1W2PQF6 199 aa18.39■□□□□ 0.53
PTN-201ENST00000348225 SLCO1B7G3V0H7 640 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms