RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 NLRP9Q7RTR0 991 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 ZNF248Q8NDW4 579 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 OR52K1Q8NGK4 314 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 SNIP1Q8TAD8 396 aaKnown RBP15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 RDH14Q9HBH5 336 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 WASH6PQ9NQA3 447 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 POT1Q9NUX5 634 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 NLE1Q9NVX2 485 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 KCTD3Q9Y597 815 aa15.52■□□□□ 0.08
TSPAN4-201ENST00000346501 IGHV1OR21-1A0A087WYE8 117 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 TAF4O00268 1085 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 HGSO14964 777 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 SUN1O94901 812 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 ITGA2BP08514 1039 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 XRCC1P18887 633 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 PBLDP30039 288 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 CSTF2P33240 577 aaKnown RBP eCLIP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 ABCG1P45844 678 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 MAPK9P45984 424 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 CACNG1Q06432 222 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 SQSTM1Q13501 440 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 KHDC1Q4VXA5 237 aaKnown RBP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 AGAP9Q5VTM2 703 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 BROXQ5VW32 411 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 ABRAXAS1Q6UWZ7 409 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 DET1Q7L5Y6 550 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 B3GNT8Q7Z7M8 397 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 JAMLQ86YT9 394 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 NXPE1Q8N323 547 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 RASGEF1AQ8N9B8 481 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 OR4D9Q8NGE8 314 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 DNAJC1Q96KC8 554 aaKnown RBP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 SLC46A1Q96NT5 459 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 SLC23A2Q9UGH3 650 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 TMPRSS11EQ9UL52 423 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 LOXL2Q9Y4K0 774 aa15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 PCYT1BQ9Y5K3 369 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 ZFC3H1O60293 1989 aaKnown RBP15.51■□□□□ 0.07
TSPAN4-201ENST00000346501 URB1O60287 2271 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 LILRA5A6NI73 299 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 H7C0S8 307 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 PGRMC1O00264 195 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 QSOX1O00391 747 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 GAPDHSO14556 408 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 ATP1B2P14415 290 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 AMD1P17707 334 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 ADRA1DP25100 572 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 RPL10P27635 214 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 CD1CP29017 333 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 RPL22P35268 128 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 PRAMEP78395 509 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 XIAPP98170 497 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 CDK16Q00536 496 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 ZFP36L1Q07352 338 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 DMPKQ09013 629 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 LYPLAL1Q5VWZ2 237 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 TMEM71Q6P5X7 295 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 PLXDC1Q8IUK5 500 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 ZNF547Q8IVP9 402 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 PPHLN1Q8NEY8 458 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 NCSTNQ92542 709 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 MAGOHBQ96A72 148 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 SGF29Q96ES7 293 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 CDKN2AIPNLQ96HQ2 116 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 UCK1Q9HA47 277 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 EIF2B3Q9NR50 452 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 PIH1D1Q9NWS0 290 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 TRMT1Q9NXH9 659 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 ZDHHC3Q9NYG2 299 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 BFARQ9NZS9 450 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 PISDQ9UG56 409 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 ANAPC5Q9UJX4 755 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 ACSL5Q9ULC5 683 aa15.5■□□□□ 0.07
TSPAN4-201ENST00000346501 SCN8AQ9UQD0 1980 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 APC2O95996 2303 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 A0A087WV48 116 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 A6NCN8 305 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 MGAT4DA6NG13 374 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 GPR39O43194 453 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 EML2O95834 649 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 SLC35G4P0C7Q5 338 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 ETS1P14921 441 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 EIF2S3P41091 472 aaKnown RBP15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 PDX1P52945 283 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 LIMK2P53671 638 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 DRG2P55039 364 aaKnown RBP15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 MSLNQ13421 630 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 KRT33BQ14525 404 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 GSE1Q14687 1217 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 SIX1Q15475 284 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 BCL7AQ4VC05 210 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 NKAIN2Q5VXU1 208 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 KLHL35Q6PF15 583 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 WDR74Q6RFH5 385 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 ZNF761Q86XN6 746 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 SLITRK4Q8IW52 837 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 SLC35F6Q8N357 371 aa15.49■□□□□ 0.07
TSPAN4-201ENST00000346501 AGBL5Q8NDL9 886 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms