RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 METTL25Q8N6Q8 603 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 ZUFSPQ96AP4 578 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 TMEM125Q96AQ2 219 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 MYO19Q96H55 970 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 IL21Q9HBE4 155 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 ARMC1Q9NVT9 282 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PLK2Q9NYY3 685 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 PCDH10Q9P2E7 1040 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 CPQQ9Y646 472 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 SLC30A1Q9Y6M5 507 aa15.26■□□□□ 0.03
UPF3B-202ENST00000345865 SCN8AQ9UQD0 1980 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 NRG2O14511 850 aaPredicted RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 OR7A17O14581 309 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 HSPA8P11142 646 aaKnown RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 ETS2P15036 469 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 CDH18Q13634 790 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 VEPH1Q14D04 833 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 ARMC12Q5T9G4 340 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 SERPINA9Q86WD7 417 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 MFN1Q8IWA4 741 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 CHERPQ8IWX8 916 aaKnown RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 AHI1Q8N157 1196 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 HJURPQ8NCD3 748 aaPredicted RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 PPWD1Q96BP3 646 aaKnown RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 ZNF382Q96SR6 550 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 CIPCQ9C0C6 399 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 CCM2LQ9NUG4 571 aaPredicted RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 SOCS2O14508 198 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 PRAMEF1O95521 474 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 GNRH1P01148 92 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 OXTRP30559 389 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 HSPA13P48723 471 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 MRPL19P49406 292 aaKnown RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 ERVK-8P63133 956 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 RAB33AQ14088 237 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 AAK1Q2M2I8 961 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 COQ5Q5HYK3 327 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 SPOUT1Q5T280 376 aaKnown RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 FAM117BQ6P1L5 589 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 PRMT9Q6P2P2 845 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 KIAA2013Q8IYS2 634 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 MYO1HQ8N1T3 1032 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 SFRP1Q8N474 314 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 DCAF4L2Q8NA75 395 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 PROKR1Q8TCW9 393 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 PDLIM5Q96HC4 596 aaKnown RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 PRPF18Q99633 342 aaKnown RBP15.25■□□□□ 0.03
UPF3B-202ENST00000345865 ZNF696Q9H7X3 374 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 GID8Q9NWU2 228 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 USP22Q9UPT9 525 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 COMMD10Q9Y6G5 202 aa15.25■□□□□ 0.03
UPF3B-202ENST00000345865 A8MX80 341 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 AKAP10O43572 662 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 ZNF821O75541 412 aaPredicted RBP15.24■□□□□ 0.03
UPF3B-202ENST00000345865 SLC22A3O75751 556 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 CLDN7O95471 211 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 CHEK2O96017 543 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 CAPN1P07384 714 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 UGT1A1P22309 533 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 UGT1A4P22310 534 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 UGT1A3P35503 534 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 UGT1A5P35504 534 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 KCNK10P57789 538 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 PRKCQQ04759 706 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 NFYCQ13952 458 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 CDKN3Q16667 212 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 LCN8Q6JVE9 175 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 ERMP1Q7Z2K6 904 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 GOLGA7Q7Z5G4 137 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 ZSWIM9Q86XI8 627 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 SLC39A11Q8N1S5 342 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 STK40Q8N2I9 435 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 GRIN3AQ8TCU5 1115 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 ZNF296Q8WUU4 475 aaPredicted RBP15.24■□□□□ 0.03
UPF3B-202ENST00000345865 NCSTNQ92542 709 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.24■□□□□ 0.035e-7■■■■■ 55
UPF3B-202ENST00000345865 VOPP1Q96AW1 172 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 TMEM74Q96NL1 305 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 DEFB118Q96PH6 123 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 C17orf80Q9BSJ5 609 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 NSUN3Q9H649 340 aaKnown RBP15.24■□□□□ 0.03
UPF3B-202ENST00000345865 IL26Q9NPH9 171 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 AURKCQ9UQB9 309 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 INSL5Q9Y5Q6 135 aa15.24■□□□□ 0.03
UPF3B-202ENST00000345865 FAM149AA5PLN7 773 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 H0YJX3 145 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 PLOD2O00469 737 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 ARPC2O15144 300 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 EEDO75530 441 aaKnown RBP15.23■□□□□ 0.03
UPF3B-202ENST00000345865 OLFM2O95897 454 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 CLPTM1O96005 669 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 FAM58BPP0C7Q3 252 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 MTHFD1P11586 935 aaKnown RBP15.23■□□□□ 0.03
UPF3B-202ENST00000345865 BMP2P12643 396 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 ATP6V1B1P15313 513 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 SOX11P35716 441 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 PPP3CCP48454 512 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 NAA20P61599 178 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 SEMG2Q02383 582 aa15.23■□□□□ 0.03
UPF3B-202ENST00000345865 GRIK2Q13002 908 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms