RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 MSLNQ13421 630 aaPredicted RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 SLC29A2Q14542 456 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 CASP8Q14790 479 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 CRYMQ14894 314 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 ANKRD20A4Q4UJ75 823 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 TSTD2Q5T7W7 516 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 SLC30A9Q6PML9 568 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 ARL10Q8N8L6 244 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 FAM46DQ8NEK8 389 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 OR2W6PQ8NHA6 318 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 BRSK1Q8TDC3 778 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 FCRL3Q96P31 734 aaPredicted RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 RANBP9Q96S59 729 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 KIFC1Q9BW19 673 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 BOCQ9BWV1 1114 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 CDH19Q9H159 772 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 DPEP2Q9H4A9 486 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 MAGEE1Q9HCI5 957 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 PPANQ9NQ55 473 aaKnown RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 PLAAQ9Y263 795 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 FAM237BA0A1B0GVD1 139 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 MAGEB16A2A368 324 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 FADS2P1A8MWK0 482 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 LDB2O43679 373 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 PIAS1O75925 651 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 CRTAMO95727 393 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 AK4P27144 223 aaPredicted RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 TEAD1P28347 426 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 PHBP35232 272 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 ACTR1BP42025 376 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 ACTR1AP61163 376 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 INSM1Q01101 510 aaPredicted RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 TARDBPQ13148 414 aaKnown RBP eCLIP13.64□□□□□ -0.23
TPM4-202ENST00000344824 TAF1AQ15573 450 aaPredicted RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 SPANXN3Q5MJ09 141 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 PERM1Q5SV97 790 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 HENMT1Q5T8I9 393 aaKnown RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 HDXQ7Z353 690 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 TMPRSS12Q86WS5 348 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 GALNT13Q8IUC8 556 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 UNC5BQ8IZJ1 945 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
TPM4-202ENST00000344824 GPR26Q8NDV2 337 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 OR13C4Q8NGS5 318 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 GSDMBQ8TAX9 411 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 FBF1Q8TES7 1133 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 MRRFQ96E11 262 aaKnown RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 DNAJC1Q96KC8 554 aaKnown RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 OR2M4Q96R27 311 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 NAT9Q9BTE0 207 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 TMEM121BQ9BXQ6 578 aaPredicted RBP13.64□□□□□ -0.23
TPM4-202ENST00000344824 GSDMCQ9BYG8 508 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 PLAC1Q9HBJ0 212 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 HACD3Q9P035 362 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 PADI4Q9UM07 663 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 CLCA2Q9UQC9 943 aa13.64□□□□□ -0.23
TPM4-202ENST00000344824 COL27A1Q8IZC6 1860 aaPredicted RBP13.63□□□□□ -0.23
TPM4-202ENST00000344824 ANKRD11Q6UB99 2663 aaPredicted RBP13.63□□□□□ -0.23
TPM4-202ENST00000344824 A0A087WUV0 522 aaPredicted RBP13.63□□□□□ -0.23
TPM4-202ENST00000344824 EME2A4GXA9 379 aaPredicted RBP13.63□□□□□ -0.23
TPM4-202ENST00000344824 C2orf81A6NN90 581 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 USP1O94782 785 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 MT-CO3P00414 261 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 SHBGP04278 402 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 PROS1P07225 676 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 E2F1Q01094 437 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 CBLBQ13191 982 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 BIRC2Q13490 618 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 EFTUD2Q15029 972 aaKnown RBP eCLIP13.63□□□□□ -0.234e-7■■■■□ 22.8
TPM4-202ENST00000344824 STEAP4Q687X5 459 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 TRMT10BQ6PF06 316 aaKnown RBP13.63□□□□□ -0.23
TPM4-202ENST00000344824 SFTPA2Q8IWL1 248 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 TTC30BQ8N4P2 665 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 OR4K2Q8NGD2 314 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 GDAP1Q8TB36 358 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 MDM1Q8TC05 714 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 NAT6Q93015 286 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 CCDC74AQ96AQ1 378 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 EID2BQ96D98 161 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 MRM3Q9HC36 420 aaKnown RBP13.63□□□□□ -0.23
TPM4-202ENST00000344824 RAD18Q9NS91 495 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 ZNF446Q9NWS9 450 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 ZNHIT2Q9UHR6 403 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 SLC17A4Q9Y2C5 497 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 PRKAB1Q9Y478 270 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 PLEKHM1Q9Y4G2 1056 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 OAS3Q9Y6K5 1087 aaKnown RBP13.63□□□□□ -0.23
TPM4-202ENST00000344824 APC2O95996 2303 aa13.63□□□□□ -0.23
TPM4-202ENST00000344824 TCRBV9S1A1TA0A576 114 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 MROH6A6NGR9 719 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 SMIM23A6NLE4 172 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 GOLGA8KD6RF30 607 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 GOLGA8TH3BQL2 631 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 STX7O15400 261 aaKnown RBP13.62□□□□□ -0.23
TPM4-202ENST00000344824 OPA1O60313 960 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 SPAG6O75602 509 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 SLC25A14O95258 325 aaPredicted RBP13.62□□□□□ -0.23
TPM4-202ENST00000344824 GP1BAP07359 652 aa13.62□□□□□ -0.23
TPM4-202ENST00000344824 IVLP07476 585 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms