RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ARF5P84085 180 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 TRAF2Q12933 501 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 EP400NLQ6ZTU2 488 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 SPPL2CQ8IUH8 684 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 CPNE9Q8IYJ1 553 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 HS6ST3Q8IZP7 471 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 VPS33AQ96AX1 596 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 NMD3Q96D46 503 aaKnown RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 LINGO1Q96FE5 620 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 GPATCH1Q9BRR8 931 aaKnown RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 HGH1Q9BTY7 390 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 C1orf50Q9BV19 199 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 NKX2-4Q9H2Z4 354 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 SMPD4Q9NXE4 827 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 TRMT6Q9UJA5 497 aaKnown RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 ZNF225Q9UK10 706 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 OAS3Q9Y6K5 1087 aaKnown RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 VPS26AO75436 327 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 RFPL2O75678 378 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 TNFAIP8O95379 198 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 PYGLP06737 847 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 RPS17P08708 135 aaKnown RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 CES1P23141 567 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 PPP3CCP48454 512 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 HSPA13P48723 471 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 HK3P52790 923 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 TAS2R42Q7RTR8 314 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 RBM23Q86U06 439 aaKnown RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 SLC15A3Q8IY34 581 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 METTL25Q8N6Q8 603 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 OR2T34Q8NGX1 318 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 OR2T3Q8NH03 318 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 BHMTQ93088 406 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 CDK15Q96Q40 435 aa16.14■□□□□ 0.17
LITAF-201ENST00000339430 SDR39U1Q9NRG7 319 aaPredicted RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 EIF2B4Q9UI10 523 aaKnown RBP16.14■□□□□ 0.17
LITAF-201ENST00000339430 TRANK1O15050 2925 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 ILVBLA1L0T0 632 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 SYCE1LA8MT33 242 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 FXYD1O00168 92 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 STX7O15400 261 aaKnown RBP16.13■□□□□ 0.17
LITAF-201ENST00000339430 TPST1O60507 370 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 EPCAMP16422 314 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 PSMC3P17980 439 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 UGT1A6P19224 532 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 GABRR2P28476 465 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 CASP2P42575 452 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 TXNDC8Q6A555 127 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 KLHDC10Q6PID8 442 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 IFNEQ86WN2 208 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 MFN1Q8IWA4 741 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 AHI1Q8N157 1196 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 ELMOD1Q8N336 334 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 RIN3Q8TB24 985 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 CMTM6Q9NX76 183 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 CD274Q9NZQ7 290 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 PCTPQ9UKL6 214 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 ARIH1Q9Y4X5 557 aaPredicted RBP16.13■□□□□ 0.17
LITAF-201ENST00000339430 E5RI56 91 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 TMCC1O94876 653 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 TSPAN12O95859 305 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 ARL1P40616 181 aaPredicted RBP16.13■□□□□ 0.17
LITAF-201ENST00000339430 MTA1Q13330 715 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 NADK2Q4G0N4 442 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 PABPC1LQ4VXU2 614 aaKnown RBP16.13■□□□□ 0.17
LITAF-201ENST00000339430 PPP2R2DQ66LE6 453 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 CXorf57Q6NSI4 855 aaKnown RBP16.13■□□□□ 0.17
LITAF-201ENST00000339430 RBM44Q6ZP01 1051 aaKnown RBP16.13■□□□□ 0.17
LITAF-201ENST00000339430 GAREM2Q75VX8 874 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 NKAPQ8N5F7 415 aaKnown RBP16.13■□□□□ 0.17
LITAF-201ENST00000339430 DNAJB14Q8TBM8 379 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 CD200R1Q8TD46 325 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 ZFAND2BQ8WV99 257 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 LRRC58Q96CX6 371 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 SLC22A12Q96S37 553 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 TCF12Q99081 682 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 HOPXQ9BPY8 73 aaPredicted RBP16.13■□□□□ 0.17
LITAF-201ENST00000339430 CORO1BQ9BR76 489 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 MSRAQ9UJ68 235 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 GPR45Q9Y5Y3 372 aa16.13■□□□□ 0.17
LITAF-201ENST00000339430 ZFC3H1O60293 1989 aaKnown RBP16.13■□□□□ 0.17
LITAF-201ENST00000339430 ANAPC1Q9H1A4 1944 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 A0A1B0GVM2 712 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 FAM149AA5PLN7 773 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 CCDC160A6NGH7 325 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 SNX2O60749 519 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 PRAMEF12O95522 483 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 CD160O95971 181 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 C1RP00736 705 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 BMP1P13497 986 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 IDO1P14902 403 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 CTPS1P17812 591 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 MZF1P28698 734 aaPredicted RBP16.12■□□□□ 0.17
LITAF-201ENST00000339430 ILF2Q12905 390 aaKnown RBP16.12■□□□□ 0.17
LITAF-201ENST00000339430 FUT11Q495W5 492 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 BLOC1S3Q6QNY0 202 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 TMC8Q8IU68 726 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 CARNMT1Q8N4J0 409 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 OR2T11Q8NH01 316 aa16.12■□□□□ 0.17
LITAF-201ENST00000339430 RPL10LQ96L21 214 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms