RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 RPP25Q9BUL9 199 aaKnown RBP22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 FAM83DQ9H4H8 585 aa22.14■■□□□ 1.14
PDLIM2-203ENST00000339162 TSPAN11A1L157 253 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 TRPC5OSA6NMA1 111 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 SNX2O60749 519 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 ZNF30P17039 623 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 CLCQ05315 142 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 KLF10Q13118 480 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 RUNX3Q13761 415 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 C9orf64Q5T6V5 341 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 GPRC6AQ5T6X5 926 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 ZBTB2Q8N680 514 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 TERB1Q8NA31 727 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 FAM13CQ8NE31 585 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 NSUN3Q9H649 340 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 ADAMTS6Q9UKP5 1117 aa22.14■■□□□ 1.13
PDLIM2-203ENST00000339162 DOCK8Q8NF50 2099 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 ATP6AP2A0A1C7CYW4 349 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 ATP6AP2O75787 350 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 ATP6V1G2O95670 118 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 GJA4P35212 333 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 OPRD1P41143 372 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 PPP1R3AQ16821 1122 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 HNRNPA1L2Q32P51 320 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 ZNF648Q5T619 568 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 PARM1Q6UWI2 310 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 SBSNQ6UWP8 590 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 TMEM184AQ6ZMB5 413 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 FGF14Q92915 247 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 WRAP53Q9BUR4 548 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 RIOK2Q9BVS4 552 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 OBP2AQ9NY56 170 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 PTGDR2Q9Y5Y4 395 aa22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 TCF20Q9UGU0 1960 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-203ENST00000339162 AKT1P31749 480 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 VASPP50552 380 aaPredicted RBP22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 FCHO2Q0JRZ9 810 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 ANKS6Q68DC2 871 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 SERPINA13PQ6UXR4 307 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 FRA10AC1Q70Z53 315 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 MCUR1Q96AQ8 359 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 TIFAQ96CG3 184 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 PDLIM5Q96HC4 596 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 LRIG1Q96JA1 1093 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 MAELQ96JY0 434 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 LENG8Q96PV6 779 aaPredicted RBP22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 ZBTB26Q9HCK0 441 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 PLXNB3Q9ULL4 1909 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 KLK8O60259 260 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 GUCA1CO95843 209 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 PRDX3P30048 256 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 ZDHHC20Q5W0Z9 365 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 CYHR1Q6ZMK1 362 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 YAF2Q8IY57 180 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 CHFRQ96EP1 664 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 ACOX2Q99424 681 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 SPATS2LQ9NUQ6 558 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 DKK3Q9UBP4 350 aa22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 EIF2B4Q9UI10 523 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-203ENST00000339162 RPS17P08708 135 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 DGKAP23743 735 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 SLC25A3Q00325 362 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 NAA25Q14CX7 972 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 UGT3A2Q3SY77 523 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 ATAT1Q5SQI0 421 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 TMPRSS6Q8IU80 811 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 MYO1HQ8N1T3 1032 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 AFAP1L2Q8N4X5 818 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 PIP4K2CQ8TBX8 421 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 CCDC28BQ9BUN5 200 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 MEAF6Q9HAF1 191 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 CLEC1BQ9P126 229 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 DNAJC15Q9Y5T4 150 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 FADS2P1A8MWK0 482 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 ELFN1P0C7U0 828 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 CCR7P32248 378 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 MMP12P39900 470 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 RGS4P49798 205 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 KHDC1Q4VXA5 237 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 DPPA4Q7L190 304 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 CPA6Q8N4T0 437 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 DCBLD1Q8N8Z6 715 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 ARRDC3Q96B67 414 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 ABHD8Q96I13 439 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 FAR2Q96K12 515 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 C3orf30Q96M34 536 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 PCTPQ9UKL6 214 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 COQ6Q9Y2Z9 468 aa22.11■■□□□ 1.13
PDLIM2-203ENST00000339162 COPAP53621 1224 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 LCP2Q13094 533 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 ACOX1Q15067 660 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 PHKG1Q16816 387 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 LIPIQ6XZB0 460 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 CLYBLQ8N0X4 340 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 CEP70Q8NHQ1 597 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 DLG3Q92796 817 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 ULK4Q96C45 1275 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 CLPTM1LQ96KA5 538 aa22.1■■□□□ 1.13
PDLIM2-203ENST00000339162 LATS2Q9NRM7 1088 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms