RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ZNF234Q14588 700 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 C9orf57Q5W0N0 161 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 SCIMPQ6UWF3 145 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 CLNKQ7Z7G1 428 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 DIRAS2Q96HU8 199 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
HLCS-201ENST00000336648 EGFL7Q9UHF1 273 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 CDH22Q9UJ99 828 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 OAS3Q9Y6K5 1087 aaKnown RBP12.97□□□□□ -0.33
HLCS-201ENST00000336648 VWDEQ8N2E2 1590 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 NPEPPSL1A6NEC2 478 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 LYPLA1O75608 230 aaPredicted RBP12.97□□□□□ -0.33
HLCS-201ENST00000336648 KDM4BO94953 1096 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 LRATO95237 230 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 PRNPP04156 253 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 MMP8P22894 467 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 RANBP3LQ86VV4 465 aaPredicted RBP12.97□□□□□ -0.33
HLCS-201ENST00000336648 NPAS2Q99743 824 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 PRRG4Q9BZD6 226 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 RNF208Q9H0X6 261 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 IGFLR1Q9H665 355 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 MID1O15344 667 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 NCK1P16333 377 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 LAG3P18627 525 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 HNF4AP41235 474 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 BEX3Q00994 111 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 ZNF311Q5JNZ3 666 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 TWIST2Q8WVJ9 160 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 IKZF2Q9UKS7 526 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 DCCP43146 1447 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 ZNF12P17014 697 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 CTPS1P17812 591 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 CMPK1P30085 196 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 RPS9P46781 194 aaKnown RBP12.97□□□□□ -0.33
HLCS-201ENST00000336648 STXBP1P61764 594 aaKnown RBP12.97□□□□□ -0.33
HLCS-201ENST00000336648 RPL7AP62424 266 aaKnown RBP12.97□□□□□ -0.33
HLCS-201ENST00000336648 FKBP1BP68106 108 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 RHEBQ15382 184 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 CA9Q16790 459 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 MED27Q6P2C8 311 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 ADGRD1Q6QNK2 874 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 TDRPQ86YL5 185 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 MCEMP1Q8IX19 187 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 UBR7Q8N806 425 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 FCRL4Q96PJ5 515 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 TTPALQ9BTX7 342 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 LRRC4CQ9HCJ2 640 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 ARL8BQ9NVJ2 186 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 MAP10Q9P2G4 905 aa12.97□□□□□ -0.33
HLCS-201ENST00000336648 YDJCA8MPS7 323 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 PAPSS1O43252 624 aaPredicted RBP12.96□□□□□ -0.33
HLCS-201ENST00000336648 AP2A1O95782 977 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 GRK5P34947 590 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 PITPNAQ00169 270 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 RIPPLY1Q0D2K3 151 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 PPP1R26Q5T8A7 1209 aaPredicted RBP12.96□□□□□ -0.33
HLCS-201ENST00000336648 FAM91A1Q658Y4 838 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 QSOX2Q6ZRP7 698 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 CSPG4P5Q96PW8 444 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 THUMPD1Q9NXG2 353 aaKnown RBP12.96□□□□□ -0.33
HLCS-201ENST00000336648 AASSQ9UDR5 926 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 NPHS1O60500 1241 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 IFNA7P01567 189 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 APODP05090 189 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 PGRP06401 933 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 TIE1P35590 1138 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 DNASE1L1P49184 302 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 DPY19L1Q2PZI1 675 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 LAPTM4BQ86VI4 370 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 SLC43A3Q8NBI5 491 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 APOLD1Q96LR9 279 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 ZNF347Q96SE7 839 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 ABCB9Q9NP78 766 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 LGALS13Q9UHV8 139 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 ALG5Q9Y673 324 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 ATP6AP2A0A1C7CYW4 349 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 TIPRLO75663 272 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 ATP6AP2O75787 350 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 ZBTB11O95625 1053 aaPredicted RBP12.96□□□□□ -0.33
HLCS-201ENST00000336648 GLUD1P00367 558 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 SAGP10523 405 aaPredicted RBP12.96□□□□□ -0.33
HLCS-201ENST00000336648 TFPIP10646 304 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 GJA1P17302 382 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 MSR1P21757 451 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 MARCKSL1P49006 195 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 SEPHS1P49903 392 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 LIMK2P53671 638 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 PRR5P85299 388 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 RAPSNQ13702 412 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 CACUL1Q86Y37 369 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 UNC5BQ8IZJ1 945 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 FSTL5Q8N475 847 aaPredicted RBP12.96□□□□□ -0.33
HLCS-201ENST00000336648 NATD1Q8N6N6 113 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 MAGEE1Q9HCI5 957 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 SLCO1B3Q9NPD5 702 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 EIF3KQ9UBQ5 218 aaKnown RBP12.96□□□□□ -0.33
HLCS-201ENST00000336648 FETUBQ9UGM5 382 aa12.96□□□□□ -0.33
HLCS-201ENST00000336648 PCDHGC3Q9UN70 934 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms