RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PGAM4Q8N0Y7 254 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 EFHBQ8N7U6 833 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 RP9Q8TA86 221 aaKnown RBP13.76□□□□□ -0.21
SF1-202ENST00000334944 RAET1EQ8TD07 263 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 CANT1Q8WVQ1 401 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 WBP2Q969T9 261 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 TRIM8Q9BZR9 551 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 MIR1-1HGQ9H1L0 117 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 MRM3Q9HC36 420 aaKnown RBP13.76□□□□□ -0.21
SF1-202ENST00000334944 PCDHGA8Q9Y5G5 932 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 MAN1A2O60476 641 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 GLP2RO95838 553 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 ALDH4A1P30038 563 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 HTR7P34969 479 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 CLCN5P51795 746 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 ECT2LQ008S8 904 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 PIGFQ07326 219 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 OR4D1Q15615 310 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 IQCF2Q8IXL9 164 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 DEPDC4Q8N2C3 294 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 ABHD11Q8NFV4 315 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 CALML6Q8TD86 181 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 TRPC4APQ8TEL6 797 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 UBXN10Q96LJ8 280 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 ADI1Q9BV57 179 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 GALPQ9UBC7 116 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 WARS2Q9UGM6 360 aaKnown RBP13.76□□□□□ -0.21
SF1-202ENST00000334944 ZNF229Q9UJW7 825 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 LRFN2Q9ULH4 789 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 IGLV3-10A0A075B6K4 115 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 F5H5T6 163 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CLPXO76031 633 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CCL23P55773 120 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 SLC13A2Q13183 592 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 DLG3Q92796 817 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 ZNF385DQ9H6B1 395 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 VTI1BQ9UEU0 232 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 PATJQ8NI35 1801 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 DLGAP1O14490 977 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 GPC4O75487 556 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 C8BP07358 591 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CHRNB1P11230 501 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CST5P28325 142 aaPredicted RBP13.75□□□□□ -0.21
SF1-202ENST00000334944 OR1D2P34982 312 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CLK3P49761 638 aaKnown RBP13.75□□□□□ -0.21
SF1-202ENST00000334944 LSM3P62310 102 aaKnown RBP13.75□□□□□ -0.21
SF1-202ENST00000334944 FAM189BP81408 668 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 TIAL1Q01085 375 aaKnown RBP eCLIP13.75□□□□□ -0.217e-8■■■■□ 22.6
SF1-202ENST00000334944 IL10RBQ08334 325 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 TAS2R42Q7RTR8 314 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 TMEM126BQ8IUX1 230 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 PTGR2Q8N8N7 351 aaPredicted RBP13.75□□□□□ -0.21
SF1-202ENST00000334944 OR4K2Q8NGD2 314 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CNDP1Q96KN2 507 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CASD1Q96PB1 797 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 GSTO2Q9H4Y5 243 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 TMEM161AQ9NX61 479 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 TBC1D14Q9P2M4 693 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 DKK3Q9UBP4 350 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 IKZF3Q9UKT9 509 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 BTRCQ9Y297 605 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CARD8Q9Y2G2 431 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 TNFRSF10AO00220 468 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CLOCKO15516 846 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 SLC7A4O43246 635 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 SNAP91O60641 907 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 PRAMEF11O60813 436 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 XYLBO75191 536 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 KLKB1P03952 638 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 PSME3P61289 254 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 SH3BP2P78314 561 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 NRG1Q02297 640 aaPredicted RBP13.75□□□□□ -0.21
SF1-202ENST00000334944 SPCS2Q15005 226 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 FAM117BQ6P1L5 589 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 SCIMPQ6UWF3 145 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 CYHR1Q6ZMK1 362 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 KIAA0408Q6ZU52 694 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 DEFB128Q7Z7B8 93 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 LRRC49Q8IUZ0 686 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 MROQ9BYG7 248 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 MFSD1Q9H3U5 465 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 C5orf42Q9H799 3197 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 PARVBQ9HBI1 364 aa13.75□□□□□ -0.21
SF1-202ENST00000334944 COL4A4P53420 1690 aaPredicted RBP13.74□□□□□ -0.21
SF1-202ENST00000334944 PRORSD1PA6NEY8 169 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 SLC38A8A6NNN8 435 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 ZBBXA8MT70 800 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 SYN3O14994 580 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 AXIN1O15169 862 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 UBDO15205 165 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 NPHS1O60500 1241 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 MYCLP1P12525 358 aaPredicted RBP13.74□□□□□ -0.21
SF1-202ENST00000334944 ELK4P28324 431 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 HOXD9P28356 352 aaPredicted RBP13.74□□□□□ -0.21
SF1-202ENST00000334944 BMPR1AP36894 532 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 ATN1P54259 1190 aaPredicted RBP13.74□□□□□ -0.21
SF1-202ENST00000334944 FASTKQ14296 549 aaKnown RBP13.74□□□□□ -0.21
SF1-202ENST00000334944 TEX26Q8N6G2 289 aa13.74□□□□□ -0.21
SF1-202ENST00000334944 ZFP90Q8TF47 636 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms