RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 AGAP7PQ5VUJ5 663 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 ANKRD34AQ69YU3 496 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 PLEKHG7Q6ZR37 379 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 SLC16A12Q6ZSM3 486 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 PAGE2Q7Z2X7 111 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 BNIPLQ7Z465 357 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 TFAP2DQ7Z6R9 452 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 BPHLQ86WA6 291 aaPredicted RBP13.6□□□□□ -0.23
SYNE3-201ENST00000334258 NDNFQ8TB73 568 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 FKBP10Q96AY3 582 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 ACOX2Q99424 681 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 MARCH4Q9P2E8 410 aaPredicted RBP13.6□□□□□ -0.23
SYNE3-201ENST00000334258 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 GPR45Q9Y5Y3 372 aa13.6□□□□□ -0.23
SYNE3-201ENST00000334258 ZNF99A8MXY4 864 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 PIRO00625 290 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 MOCS2O96007 188 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 RAP2AP10114 183 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 MAGP20916 626 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 PRKACGP22612 351 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 HOXA11P31270 313 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 PNPLA4P41247 253 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 CXCR3P49682 368 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 SLC13A2Q13183 592 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 PPP2R2DQ66LE6 453 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 RANBP10Q6VN20 620 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 FNDC5Q8NAU1 212 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 SLC39A8Q9C0K1 460 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 AKIP1Q9NQ31 210 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 COMMD8Q9NX08 183 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 U3KQV3 271 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 ZNF638Q14966 1978 aaKnown RBP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 TPPPO94811 219 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 SEC24AO95486 1093 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 UGT2B4P06133 528 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 ANXA6P08133 673 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 FGF4P08620 206 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 BMP4P12644 408 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 PIGAP37287 484 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 LILRA4P59901 499 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 RCAN2Q14206 197 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 GRIK4Q16099 956 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 ATP6AP1LQ52LC2 224 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 NOTUMQ6P988 496 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 PHYKPLQ8IUZ5 450 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 ABI1Q8IZP0 508 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 TMEM199Q8N511 208 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 DTWD1Q8N5C7 304 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 MINDY2Q8NBR6 621 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 BPIFB1Q8TDL5 484 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 DNAJB3Q8WWF6 145 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 KCTD13Q8WZ19 329 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 AURKBQ96GD4 344 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 PARK7Q99497 189 aaKnown RBP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 IL12RB2Q99665 862 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 C17orf80Q9BSJ5 609 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 RETREG1Q9H6L5 497 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 ZNF639Q9UID6 485 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 MAGEL2Q9UJ55 1249 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 PNMA8BQ9ULN7 279 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 ERVK-11Q9UQG0 969 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 CCDC162PA2VCL2 907 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 MATN3O15232 486 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 DLGAP3O95886 979 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 HTR1AP08908 422 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 CTSHP09668 335 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 HTR1EP28566 365 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 CCR1P32246 355 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 SEPHS1P49903 392 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 ARSDP51689 593 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 FPGSQ05932 587 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 OR4D1Q15615 310 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 CTF1Q16619 201 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 SULT1C3Q6IMI6 304 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 FBXO39Q8N4B4 442 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 ZNF641Q96N77 438 aaPredicted RBP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 TSGA13Q96PP4 275 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 NT5MQ9NPB1 228 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 RNF112Q9ULX5 631 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 PIN4Q9Y237 131 aaKnown RBP13.59□□□□□ -0.23
SYNE3-201ENST00000334258 KCTD3Q9Y597 815 aa13.59□□□□□ -0.23
SYNE3-201ENST00000334258 UBA6A0AVT1 1052 aaPredicted RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 ASPDHA6ND91 283 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 PARNO95453 639 aaKnown RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 SOX4Q06945 474 aaPredicted RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 SELENBP1Q13228 472 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 RBBP7Q16576 425 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 DPY19L1Q2PZI1 675 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 CTU2Q2VPK5 515 aaKnown RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 SPATS1Q496A3 300 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 COQ5Q5HYK3 327 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 KANK2Q63ZY3 851 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 TAC4Q86UU9 113 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 MUL1Q969V5 352 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 ESAMQ96AP7 390 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 PSD2Q9BQI7 771 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 THUMPD3Q9BV44 507 aaKnown RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 GDAP2Q9NXN4 497 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms