RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PRAMEF26H0Y7S4 382 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 KPNA5O15131 536 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 UGT1A9O60656 530 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 NDUFS3O75489 264 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PIRTP0C851 137 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 MYL2P10916 166 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 KELP23276 732 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 ACRV1P26436 265 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PMLP29590 882 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 AKT2P31751 481 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 LIMK2P53671 638 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TMPRSS15P98073 1019 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 POU4F1Q01851 419 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 KRT72Q14CN4 511 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 FAM91A1Q658Y4 838 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 ATG16L1Q676U5 607 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 UGT3A1Q6NUS8 523 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PNCKQ6P2M8 343 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TRMT10BQ6PF06 316 aaKnown RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 C1orf210Q8IVY1 113 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 ENDOVQ8N8Q3 282 aaKnown RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 DTWD2Q8NBA8 298 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 ARMC2Q8NEN0 867 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TEX101Q9BY14 249 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 DUSP15Q9H1R2 295 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 DENND2DQ9H6A0 471 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 ASB8Q9H765 288 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 UGT1A7Q9HAW7 530 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 UGT1A10Q9HAW8 530 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 UGT1A8Q9HAW9 530 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PCMTD2Q9NV79 361 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 SPATA6Q9NWH7 488 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 SIRPGQ9P1W8 387 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 NKX1-2Q9UD57 310 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 ATG2BQ96BY7 2078 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PLXNB3Q9ULL4 1909 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3DA0A087WVF3 549 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3IA0A087WXS9 549 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3EA0A087X179 549 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3KA0A087X1G2 549 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 IGHV1OR15-9A0A0B4J2B8 117 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 A0A1W2PQU0 124 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3FA6NER0 549 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3LB9A6J9 549 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 FCHO1O14526 889 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 MAGEC1O60732 1142 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 MMP20O60882 483 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3HP0C7X1 549 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TPBGLP0DKB5 382 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 ERVK-10P10266 1014 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 COL6A2P12110 1019 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 KIAA1024LP59773 190 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PLOD1Q02809 727 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 BST1Q10588 318 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 NAA25Q14CX7 972 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 CHRNA6Q15825 494 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3GQ6DHY5 549 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3CQ6IPX1 549 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 MACC1Q6ZN28 852 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 Q6ZVL8 140 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PHYKPLQ8IUZ5 450 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TBC1D3Q8IZP1 549 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TP53I13Q8NBR0 393 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 RAB3IL1Q8TBN0 382 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 GLYATL1Q969I3 302 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PRR11Q96HE9 360 aaPredicted RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 COX14Q96I36 57 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 NSL1Q96IY1 281 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 GPR22Q99680 433 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 PRRX2Q99811 253 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TRIM56Q9BRZ2 755 aaKnown RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 BTBD10Q9BSF8 475 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 MECRQ9BV79 373 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 SPATA16Q9BXB7 569 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 CADM1Q9BY67 442 aaKnown RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 IARS2Q9NSE4 1012 aaKnown RBP9.39□□□□□ -0.91
C11orf54-201ENST00000331239 KCNK4Q9NYG8 393 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 GPR34Q9UPC5 381 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 TECTAO75443 2155 aa9.39□□□□□ -0.91
C11orf54-201ENST00000331239 ANTXRLA6NF34 631 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 IGLON5A6NGN9 336 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 METTL12A8MUP2 240 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 PRMT5O14744 637 aaPredicted RBP9.38□□□□□ -0.91
C11orf54-201ENST00000331239 TNFRSF10CO14798 259 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 NDUFS2O75306 463 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 LMNAP02545 664 aaKnown RBP9.38□□□□□ -0.91
C11orf54-201ENST00000331239 PRKCGP05129 697 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 GNAZP19086 355 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 HNRNPA2B1P22626 353 aaKnown RBP9.38□□□□□ -0.91
C11orf54-201ENST00000331239 CRABP2P29373 138 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 ETV3P41162 512 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 MAPK9P45984 424 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 METAP1P53582 386 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 CHI3L2Q15782 390 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 ZRANB3Q5FWF4 1079 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 ZNF470Q6ECI4 717 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 ANO7Q6IWH7 933 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 LRRC8EQ6NSJ5 796 aa9.38□□□□□ -0.91
C11orf54-201ENST00000331239 FAM45BPQ6NSW5 357 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms