RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SBSNQ6UWP8 590 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 SERPINA9Q86WD7 417 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 TCEAL8Q8IYN2 117 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 AHI1Q8N157 1196 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 CDYL2Q8N8U2 506 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 FAM110BQ8TC76 370 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 ZNF296Q8WUU4 475 aaPredicted RBP14.39□□□□□ -0.11
TPM3-206ENST00000330188 VPS33AQ96AX1 596 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 CDK15Q96Q40 435 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 C1orf50Q9BV19 199 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 EVLQ9UI08 416 aaPredicted RBP14.39□□□□□ -0.11
TPM3-206ENST00000330188 TSR3Q9UJK0 312 aaKnown RBP14.39□□□□□ -0.11
TPM3-206ENST00000330188 ST14Q9Y5Y6 855 aa14.39□□□□□ -0.11
TPM3-206ENST00000330188 AQP12BA6NM10 295 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 FKTNO75072 461 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 PRAMEF1O95521 474 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 RPS3P23396 243 aaKnown RBP eCLIP14.38□□□□□ -0.11
TPM3-206ENST00000330188 CLCN2P51788 898 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 PRMT2P55345 433 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 BNIP2Q12982 314 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 PCBP2Q15366 365 aaKnown RBP eCLIP14.38□□□□□ -0.112e-8■■■□□ 17.3
TPM3-206ENST00000330188 CNPY1Q3B7I2 92 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 ISLR2Q6UXK2 745 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 Q6ZSR9 355 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 ANKRD33Q7Z3H0 272 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 ADAMTSL2Q86TH1 951 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 AQP12AQ8IXF9 295 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 LKAAEAR1Q8TD35 194 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 NAT14Q8WUY8 206 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 TMEM125Q96AQ2 219 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 VWCEQ96DN2 955 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 CCT7Q99832 543 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 BOCQ9BWV1 1114 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 TRIM54Q9BYV2 358 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 ZNF696Q9H7X3 374 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 NOL11Q9H8H0 719 aaKnown RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 GPBP1L1Q9HC44 474 aaPredicted RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 PFDN4Q9NQP4 134 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 PAPOLBQ9NRJ5 636 aaKnown RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 RIC8BQ9NVN3 520 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 EGFL7Q9UHF1 273 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 DENND4CQ5VZ89 1909 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 EME2A4GXA9 379 aaPredicted RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 HTRA2O43464 458 aaPredicted RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 EEDO75530 441 aaKnown RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 SLC22A3O75751 556 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 TNFAIP8O95379 198 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 PGM3O95394 542 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 URODP06132 367 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 ZNF7P17097 686 aaPredicted RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 NFYCQ13952 458 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 PAGE3Q5JUK9 113 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 C6orf136Q5SQH8 315 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 PTRHD1Q6GMV3 140 aaKnown RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 LCN8Q6JVE9 175 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 FRA10AC1Q70Z53 315 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 ERMP1Q7Z2K6 904 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 TMCO2Q7Z6W1 182 aaPredicted RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 DEFB118Q96PH6 123 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 SLC29A1Q99808 456 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 C2orf49Q9BVC5 232 aaPredicted RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 TRIM8Q9BZR9 551 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 TRIM15Q9C019 465 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 CIPCQ9C0C6 399 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 CLPBQ9H078 707 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 ZFYVE1Q9HBF4 777 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 CCM2LQ9NUG4 571 aaPredicted RBP14.38□□□□□ -0.11
TPM3-206ENST00000330188 ZIM2Q9NZV7 527 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 ACTR3BQ9P1U1 418 aa14.38□□□□□ -0.11
TPM3-206ENST00000330188 C1orf232A0A0U1RR37 186 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 GOLGA8CPA6NN73 597 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 BAIAP3O94812 1187 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 TRBC1P01850 177 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 FAM58BPP0C7Q3 252 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 ITGB6P18564 788 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 IL12AP29459 219 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 GKP32189 559 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 HTR6P50406 440 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 POLE2P56282 527 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 BCL2L1Q07817 233 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 CDKN3Q16667 212 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 SPATS1Q496A3 300 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 THEMIS2Q5TEJ8 643 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 RETSATQ6NUM9 610 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 CNKSR3Q6P9H4 555 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 GOLGA7Q7Z5G4 137 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 SATL1Q86VE3 508 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 SPPL2CQ8IUH8 684 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 CHERPQ8IWX8 916 aaKnown RBP14.37□□□□□ -0.11
TPM3-206ENST00000330188 ANKFN1Q8N957 763 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 FNDC5Q8NAU1 212 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 TTC16Q8NEE8 873 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 SPDYE1Q8NFV5 336 aaPredicted RBP14.37□□□□□ -0.11
TPM3-206ENST00000330188 PPWD1Q96BP3 646 aaKnown RBP14.37□□□□□ -0.11
TPM3-206ENST00000330188 ZNF689Q96CS4 500 aaPredicted RBP14.37□□□□□ -0.11
TPM3-206ENST00000330188 CIB1Q99828 191 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 ASB8Q9H765 288 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 PAK6Q9NQU5 681 aaPredicted RBP14.37□□□□□ -0.11
TPM3-206ENST00000330188 APPL1Q9UKG1 709 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 LZTS1Q9Y250 596 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms