RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 TBC1D3BA6NDS4 549 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 EIF4E1BA6NMX2 242 aaKnown RBP20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 MATN2O00339 956 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 SMIM24O75264 130 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 LINGO3P0C6S8 592 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 LAMP2P13473 410 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 PSMC3P17980 439 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 EIF4HQ15056 248 aaKnown RBP20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 TSNQ15631 228 aaKnown RBP20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZRSR2Q15696 482 aaKnown RBP20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 C9orf64Q5T6V5 341 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 C6orf163Q5TEZ5 329 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 UGT3A1Q6NUS8 523 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 EPGNQ6UW88 154 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 HSD11B1LQ7Z5J1 315 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 FGF14Q92915 247 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 GNPTGQ9UJJ9 305 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 ANGPTL2Q9UKU9 493 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 APOBEC2Q9Y235 224 aaKnown RBP20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 DPPA5A6NC42 116 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZNF30P17039 623 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 SERPINB5P36952 375 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 NFKB2Q00653 900 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZNF234Q14588 700 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 HNRNPA1L2Q32P51 320 aaKnown RBP20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 PPFIBP2Q8ND30 876 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 LKAAEAR1Q8TD35 194 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 HCAR2Q8TDS4 363 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 CHFRQ96EP1 664 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 LINGO1Q96FE5 620 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 ABCG8Q9H221 673 aa20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 TCF20Q9UGU0 1960 aaKnown RBP20.04■□□□□ 0.8
RIPPLY3-201ENST00000329553 COL4A3Q01955 1670 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 KERAO60938 352 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 ITGB6P18564 788 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 BMP8BP34820 402 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 METAP1P53582 386 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZNF678Q5SXM1 525 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZDHHC20Q5W0Z9 365 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 EP400NLQ6ZTU2 488 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 KDM1BQ8NB78 822 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 FUBP1Q96AE4 644 aaKnown RBP20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 L3HYPDHQ96EM0 354 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 PKD2L2Q9NZM6 624 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 RNF112Q9ULX5 631 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 PLXNB3Q9ULL4 1909 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 A0A088AWK7 358 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 NPEPPSL1A6NEC2 478 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 BTN3A1O00481 513 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 KPNA3O00505 521 aaPredicted RBP20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 HDAC3O15379 428 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 GRID2O43424 1007 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 XPAP23025 273 aaPredicted RBP20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 RALGDSQ12967 914 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 PFKFB4Q16877 469 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 SLC9B1Q4ZJI4 515 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 UNC50Q53HI1 259 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 Q6ZVL8 140 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 PARS2Q7L3T8 475 aaKnown RBP20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 PTGR2Q8N8N7 351 aaPredicted RBP20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 ELSPBP1Q96BH3 223 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 TMEM245Q9H330 911 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 GSTO2Q9H4Y5 243 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 TMPRSS11EQ9UL52 423 aa20.03■□□□□ 0.8
RIPPLY3-201ENST00000329553 EDDM13A0A1B0GTR0 161 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 MAP3K7O43318 606 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 ECI2O75521 394 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 SLC25A14O95258 325 aaPredicted RBP20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 TRIM16O95361 564 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 ANPEPP15144 967 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 GDI1P31150 447 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 HERVK_113P63132 956 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 MXRA7P84157 204 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 MACC1Q6ZN28 852 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 FRMD7Q6ZUT3 714 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 SCAMP4Q969E2 229 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 ERVK-6Q9BXR3 956 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZNF576Q9H609 170 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZDHHC4Q9NPG8 344 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 ZDHHC3Q9NYG2 299 aa20.02■□□□□ 0.8
RIPPLY3-201ENST00000329553 PIKFYVEQ9Y2I7 2098 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 KIAA1549LQ6ZVL6 1849 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 SUPT7LO94864 414 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 SIX3O95343 332 aaPredicted RBP20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 PRNPP04156 253 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 B4GALNT1Q00973 533 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 C1orf146Q5VVC0 180 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 SEL1L3Q68CR1 1132 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 DPPA4Q7L190 304 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 KBTBD2Q8IY47 623 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 ZNF184Q99676 751 aaPredicted RBP20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 SPATA16Q9BXB7 569 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 TNFRSF12AQ9NP84 129 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 HCN2Q9UL51 889 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 PPM1HQ9ULR3 514 aa20.02■□□□□ 0.79
RIPPLY3-201ENST00000329553 LRRC14BA6NHZ5 514 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 TMEM233B4DJY2 109 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 ETV3P41162 512 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 NSG1P42857 185 aa20.01■□□□□ 0.79
RIPPLY3-201ENST00000329553 HK2P52789 917 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms